Evidence map›Paper›PMID 42420298›Full record

ArticleNature communications2026

A metabolite-bridged complex between SerRS and SIRT2 couples NAD⁺ metabolism to translation control.

Qian Zhang, Huimin Zhang, Marscha Hirschi, Sheng Li, Gabriel C Lander, Jie Yang, Xiang-Lei Yang

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Qian Zhang *Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA.
Huimin Zhang *Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA.ORCID http://orcid.org/0009-0004-5886-1388
Marscha HirschiDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, USA.
Sheng LiDepartment of Medicine and UCSD DXMS proteomics Resource, University of California, San Diego, La Jolla, CA, USA.
Gabriel C LanderDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-4921-1135
Jie YangDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, USA. wfw7nc@virginia.edu.ORCID http://orcid.org/0000-0001-6662-4236
Xiang-Lei YangDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA. xlyang@scripps.edu.ORCID http://orcid.org/0000-0003-2554-084X

Funding

Link extracellular function of tRNA synthetase with pathological mechanism of diseaseR35GM139627 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI YANG, XIANG-LEI · 2021 to 2025
$2.3M
High-speed direct detector for cryo electron microscopyS10OD032467 · OD · SCRIPPS RESEARCH INSTITUTE, THE · PI LANDER, GABRIEL C · 2022 to 2022
$600k
NIGMS NIH HHS R35 GM139627NIH HHS S10 OD032467U.S. Department of Health & Human Services | National Institutes of Health (NIH) R35 GM139627U.S. Department of Health & Human Services | National Institutes of Health (NIH) S10OD032467
6 · The paper itself

Abstract

Cellular homeostasis requires tight coordination between metabolic and translational networks. Here we identify a direct molecular link between these processes through a cryo-EM structure of human cytosolic seryl-tRNA synthetase (SerRS) in complex with the NAD⁺-dependent deacetylase SIRT2. This interaction is promoted by the NAD⁺ metabolite ADP-ribose (ADPR), which acts as a molecular bridge between the two enzymes. Within the SIRT2 active site, ADPR engages SerRS residue K414 located in a flexible catalytic-domain loop. Acetylation of K414 is dispensable for binding. Functionally, complex formation inhibits SIRT2 deacetylase activity by blocking substrate access, while SIRT2 association suppresses SerRS aminoacylation activity by preventing tRNA binding. Thus, SerRS and SIRT2 mutually regulate each other, with ADPR enhancing while tRNA attenuating their interaction. Oxidative stress promotes this interaction via a PARP1-dependent pathway, revealing an ADPR-responsive regulatory module that couples metabolic state to translational output. This regulatory module is likely conserved across vertebrates.

Indexed as

NADProtein BiosynthesisSerine-tRNA LigaseSirtuin 2AcetylationAdenosine Diphosphate RiboseCatalytic DomainCryoelectron MicroscopyHEK293 CellsHumansModels, MolecularOxidative StressPoly (ADP-Ribose) Polymerase-1Protein BindingRNA, TransferAdenosine Diphosphate RiboseNADPARP1 protein, humanPoly (ADP-Ribose) Polymerase-1RNA, TransferSerine-tRNA LigaseSIRT2 protein, humanSirtuin 2

Identifiers

PMID42420298
PMCPMC13478228

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.