Evidence map›Paper›PMID 42418707›Full record

ArticleThe Plant journal : for cell and molecular biology2026

Hexokinase 1 facilitates post-germinative seedling growth through its catalytic function.

Mengke Zhou, Ashwin Ganpudi, Anne C Lincoln, Andrés Romanowski, Leon D Matkovics, Karen J Halliday

Abstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. A reactive oxygen species CaThe New phytologist · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mengke Zhou *Institute for Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3BF, UK.ORCID https://orcid.org/0000-0003-1043-2766
Ashwin Ganpudi *Institute for Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3BF, UK.ORCID https://orcid.org/0000-0002-9515-3899
Anne C Lincoln *Institute for Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3BF, UK.ORCID https://orcid.org/0000-0003-2822-8501
Andrés RomanowskiInstitute for Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3BF, UK.ORCID https://orcid.org/0000-0003-0737-2408
Leon D MatkovicsInstitute for Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3BF, UK.ORCID https://orcid.org/0009-0006-2711-8107
Karen J HallidayInstitute for Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3BF, UK.ORCID https://orcid.org/0000-0003-0467-104X

Funding

Biotechnology and Biological Sciences Research Council BB/N005147/1Darwin Trust of Edinburgh
6 · The paper itself

Abstract

In darkness or dim light PHYTOCHROME INTERACTING FACTORS (PIFs) induce skotomorphogenic seedling growth, which is exemplified by elongated hypocotyls. Likewise, HEXOKINASE1 (HXK1) has been reported to promote hypocotyl growth under light and nutrient limiting conditions. HXK1 is known to operate as a glucose-phosphorylating enzyme and as a glucose activated sensor-signalling molecule. Earlier work implicated HXK1 sensor-signalling in hypocotyl elongation; however, less is known of whether HXK1 enzymatic function and/or HXK1-PIF pathway interaction are involved. We provide genetic evidence that HXK1-mediated glucose-phosphorylation is required for hypocotyl cell expansion in light limiting conditions. Application of glucose-6-phosphate, the HXK1 enzymatic product, restores short gin2-1/hxk1-3 hypocotyls to wild-type length. Further, components of nuclear-located HXK1 sensor-signalling complexes, comprising VHA-B1 and RPT5B, or the Polycomb Repressive Complex 2 subunits SWN and CLF, do not contribute to this response. Unlike gin2-1/hxk1-3, the vha-B1, rpt5b swn-7, clf28, clf29 alleles only disrupt hypocotyl growth following the application of exogenous glucose and not in control conditions. mRNA-seq analysis illustrates that HXK1 and PIF signalling intersect at genes with known roles in light signalling. HXK1 imposes strong negative regulation on chloroplast and mitochondrial genomes, and also branched-chain amino acid catabolism pathway genes, which can provide a source of respiratory substrates in starvation conditions. Our study establishes the importance of HXK1 enzymatic function in supporting hypocotyl cell expansion, amino acid metabolism and the transcriptional regulation of light signalling genes.

Indexed as

ArabidopsisArabidopsis ProteinsHexokinaseSeedlingsGene Expression Regulation, PlantGlucoseHypocotylLightPhosphorylationSignal TransductionArabidopsis ProteinsATHXK1 protein, ArabidopsisGlucoseHexokinaseArabidopsis thalianahexokinasehypocotylphytochromeSkotomorphogenesis

Identifiers

PMID42418707
PMCPMC13345567

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.