Evidence map›Paper›PMID 42417706›Full record

ArticleJournal of agricultural and food chemistry2026

Germination and Polishing Reshape Microbial Communities in

Maria Eugenia Araujo Silva Oliveira, Daniel Lucino, Glen Jasper Yupanqui Garcia, Bruno Gerfi Bertozzi, Priscila Zaczuk Bassinello, José Manoel Colombari Filho, Carlos Wanderlei Piler de Carvalho, Aristóteles Góes-Neto, Liliana de Oliveira Rocha, Dirce Yorika Kabuki and 2 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of agricultural and food chemistry, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Maria Eugenia Araujo Silva OliveiraPrograma de Pós-Graduação em Alimentos e Nutrição (PPGAN), Universidade Federal do Estado do Rio de Janeiro, UNIRIO, Avenida Pateurs, 296, 22290-240 Rio de Janeiro, Rio de Janeiro, Brasil.ORCID 0000-0002-3725-048X
Daniel LucinoDepartamento de Ciência de Alimentos e Nutrição (DECAN), Programa de Pós-Graduação em Ciência de Alimentos, Faculdade de Engenharia de Alimentos (FEA), Universidade Estadual de Campinas (UNICAMP), Rua Monteiro Lobato, 80, Cidade Universitária Zeferino Vaz, 13083-862 Campinas, São Paulo, Brasil.ORCID 0000-0001-6227-9631
Glen Jasper Yupanqui GarciaDepartamento de Microbiologia, Programa de Pós-Graduação em Bioinformática, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, UFMG, Avenida Antônio Carlos, 6627, Pampulha, 31270-901 Belo Horizonte, Minas Gerais, Brasil.
Bruno Gerfi BertozziDepartamento de Ciência de Alimentos e Nutrição (DECAN), Programa de Pós-Graduação em Ciência de Alimentos, Faculdade de Engenharia de Alimentos (FEA), Universidade Estadual de Campinas (UNICAMP), Rua Monteiro Lobato, 80, Cidade Universitária Zeferino Vaz, 13083-862 Campinas, São Paulo, Brasil.
Priscila Zaczuk BassinelloEmbrapa Alimentos e Territórios, Rua Cincinato Pinto, 348, 57020-050 Maceió, Alagoas, Brasil.
José Manoel Colombari FilhoEmbrapa Arroz e Feijão, Rodovia GO-462, Km 12, Zona Rural, 75375-000 Santo Antônio de Goiás, Goiás, Brasil.
Carlos Wanderlei Piler de CarvalhoEmbrapa Agroindústria de Alimentos, Avenida das Américas, 29501, 23020-470 Rio de Janeiro, Rio de Janeiro, Brasil.
Aristóteles Góes-NetoDepartamento de Microbiologia, Programa de Pós-Graduação em Bioinformática, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, UFMG, Avenida Antônio Carlos, 6627, Pampulha, 31270-901 Belo Horizonte, Minas Gerais, Brasil.ORCID 0000-0002-7692-6243
Liliana de Oliveira RochaDepartamento de Ciência de Alimentos e Nutrição (DECAN), Programa de Pós-Graduação em Ciência de Alimentos, Faculdade de Engenharia de Alimentos (FEA), Universidade Estadual de Campinas (UNICAMP), Rua Monteiro Lobato, 80, Cidade Universitária Zeferino Vaz, 13083-862 Campinas, São Paulo, Brasil.ORCID 0000-0003-2820-4470
Dirce Yorika KabukiDepartamento de Ciência de Alimentos e Nutrição (DECAN), Programa de Pós-Graduação em Ciência de Alimentos, Faculdade de Engenharia de Alimentos (FEA), Universidade Estadual de Campinas (UNICAMP), Rua Monteiro Lobato, 80, Cidade Universitária Zeferino Vaz, 13083-862 Campinas, São Paulo, Brasil.
Otniel Freitas SilvaPrograma de Pós-Graduação em Alimentos e Nutrição (PPGAN), Universidade Federal do Estado do Rio de Janeiro, UNIRIO, Avenida Pateurs, 296, 22290-240 Rio de Janeiro, Rio de Janeiro, Brasil.ORCID 0000-0002-7658-8010
Cristina Yoshie TakeitiPrograma de Pós-Graduação em Alimentos e Nutrição (PPGAN), Universidade Federal do Estado do Rio de Janeiro, UNIRIO, Avenida Pateurs, 296, 22290-240 Rio de Janeiro, Rio de Janeiro, Brasil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Germination is a process used to improve the nutritional quality of rice. However, its impact on rice microbiomes remains poorly understood. This study evaluated the microbiota of two rice ecotypes, low-amylose (Mochi) and high-amylose (BRS Formoso), after germination and polishing using 16S rRNA and ITS amplicon sequencing. Bacterial alpha diversity was highest in commercial brown rice (Shannon index 3.21) and lowest in commercial polished rice (1.50). Beta diversity indicated that germination exerted a similar effect on bacterial community composition in both ecotypes. Principal Coordinate Analysis suggested that polishing did not markedly influence microbiome composition relative to germination. The microbial profiles of Mochi and BRS Formoso were dominated by

Indexed as

BacteriaMicrobiotaOryzaSeedsFungiGerminationRNA, Ribosomal, 16SRNA, Ribosomal, 16Salpha-diversitybeta-diversitygerminationmetagenomicspolishing

Identifiers

PMID42417706
PMCPMC13422772

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.