Evidence map›Paper›PMID 42417668›Full record

ArticleThe Journal of chemical physics2026

Simulations of solvent effects on excited state dynamics of p-DAPA, a red single benzene-based fluorophore.

Anita Houston Adams, Mark A Hix, Alice R Walker

Abstract read
In one paragraph

Article in The Journal of chemical physics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Anita Houston AdamsDepartment of Chemistry, Wayne State University, 5101 Cass Ave., Detroit, Michigan 48202, USA.ORCID 0000-0002-4338-1662
Mark A HixDepartment of Chemistry, Wayne State University, 5101 Cass Ave., Detroit, Michigan 48202, USA.ORCID 0000-0003-3371-0116
Alice R WalkerDepartment of Chemistry, Wayne State University, 5101 Cass Ave., Detroit, Michigan 48202, USA.ORCID 0000-0002-8617-3425

Funding

Computational rational design of carbohydrate and nucleic acid drug scaffolds with multiscale dynamics and AIR35GM154949 · NIGMS · WAYNE STATE UNIVERSITY · PI Alice Rachel Walker · 2024 to 2026
$1.1M
NIGMS NIH HHS R35 GM154949
6 · The paper itself

Abstract

Fluorescence-based techniques are widely used in basic science and medicine for detecting molecules and probing chemical reactions in vitro and in vivo. Red fluorophores are especially of interest due to their potential applicability for deep-tissue and whole-body imaging with low background interference. The smallest red fluorophore is the benzene-based para-diacetylphenylenediamine (p-DAPA), which has a fluorescence quantum yield of 0.06 and high brightness. However, the effect of solvent type on the photophysical properties of p-DAPA has not been extensively explored. We have employed classical force field dynamics and ab initio Born-Oppenheimer molecular dynamics calculations in an explicit solvent to explore the ground and excited state potential energy surfaces of p-DAPA. Our results show that p-DAPA exhibits stronger fluorescence in nonpolar solvents due to the appearance of additional nonradiative decay pathways in polar solvents. The type of solvent modulates the type and speed of decay pathways observed, while the overall character of the nonradiative state is maintained. This work provides insight into how p-DAPA might be adapted for biological imaging and new solvent environments.

Identifiers

PMID42417668
PMCPMC13480225

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.