Evidence map›Paper›PMID 42397961›Full record

ArticleG3 (Bethesda, Md.)2026

CYClones: a highly powered, fully genotyped, eight-parent yeast mapping population.

Gareth A Cromie, Russell S Lo, Trey S Morgan, Anne E Clark, Julee Ashmead, Martin S Timour, Amy Sirr, Joshua M Akey, Aimée M Dudley

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Gareth A CromiePacific Northwest Research Institute, Seattle, WA 98122, United States.ORCID 0000-0001-5265-1970
Russell S LoPacific Northwest Research Institute, Seattle, WA 98122, United States.
Trey S MorganPacific Northwest Research Institute, Seattle, WA 98122, United States.
Anne E ClarkDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, United States.
Julee AshmeadPacific Northwest Research Institute, Seattle, WA 98122, United States.
Martin S TimourPacific Northwest Research Institute, Seattle, WA 98122, United States.
Amy SirrPacific Northwest Research Institute, Seattle, WA 98122, United States.
Joshua M AkeyLewis Sigler Institute, Princeton University, Princeton, NJ 08540, United States.
Aimée M DudleyPacific Northwest Research Institute, Seattle, WA 98122, United States.ORCID 0000-0003-3644-0625

Funding

Identification and interpretation of introgressed hominin DNA in modern human genomesR01GM110068 · NIGMS · UNIVERSITY OF WASHINGTON · PI AKEY, JOSHUA MICHAEL · 2014 to 2024
$2.6M
High resolution genetic dissection of complex and quantitative traits in yeastR01GM117119 · NIGMS · UNIVERSITY OF WASHINGTON · PI AKEY, JOSHUA MICHAEL, DUDLEY, AIMEE M · 2016 to 2019
$2.2M
NIGMS NIH HHS R01 GM110068NIGMS NIH HHS R01 GM117119NIHPacific Northwest Research Institute
6 · The paper itself

Abstract

The budding yeast Saccharomyces cerevisiae is a remarkably adaptable organism that thrives in diverse environments. Global sequencing of natural isolates has revealed extensive genetic diversity within the species. Here, we describe the construction and characterization of CYClones (Collaborative Yeast Cross clones), a library of 11,392 segregants generated from a multiparent funnel cross of eight genetically diverse parental strains. To enable the genetic dissection of complex traits, we imputed whole-genome sequences for all segregants and show that CYClones captures a substantial fraction of the global genetic diversity of S. cerevisiae. Haplotype representation is well maintained, with each parental haplotype present at >5% frequency across >95% of the genome. Simulations demonstrate that CYClones has ≥95% power to detect variants with heritability as low as 0.36%, with mapping resolution often finer than the length of a single gene. In summary, CYClones is a powerful community resource for dissecting the genetic architecture of complex and quantitative traits, uncovering context-dependent mutational effects, and identifying causal variants underlying phenotypic diversity.

Indexed as

Chromosome MappingGenotypeSaccharomyces cerevisiaeGenetic VariationGenome, FungalHaplotypesPhenotypeQuantitative Trait LociBudding yeastFunnel crossMapping populationMultiparent advanced generation intercross

Identifiers

PMID42397961
PMCPMC13535473

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.