Evidence map›Paper›PMID 42397113›Full record

ArticleMagnetic resonance in medicine2026

A Simple, Dynamic Geometric Phantom for MRI and CT Reconstruction Pipelines: Beyond Shepp-Logan.

Tamás Hakkel, Noémi Kovács, József Sinkó, Domokos Máthé, Krisztián Szigeti

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Tamás HakkelDepartment of Biophysics and Radiation Biology, Semmelweis University, Budapest, Hungary.ORCID https://orcid.org/0009-0009-2043-3448
Noémi KovácsDepartment of Biophysics and Radiation Biology, Semmelweis University, Budapest, Hungary.
József SinkóMediso Medical Imaging Systems Ltd, Budapest, Hungary.
Domokos MáthéDepartment of Biophysics and Radiation Biology, Semmelweis University, Budapest, Hungary.ORCID https://orcid.org/0000-0001-7343-0413
Krisztián SzigetiDepartment of Biophysics and Radiation Biology, Semmelweis University, Budapest, Hungary.ORCID https://orcid.org/0000-0002-0828-9828

Funding

European Union's Horizon 2020 Research and Innovation Program 739593Mesterséges Intelligencia Nemzeti Laboratórium RRF-2.3.1-21-2022-00004Nemzeti Kutatási Fejlesztési és Innovációs Hivatal 151414Nemzeti Kutatási Fejlesztési és Innovációs Hivatal EKÖP-KDP 2024
6 · The paper itself

Abstract

A customizable, dynamic geometric phantom was developed to bridge the gap between simplistic static phantoms and highly realistic, complex 4D solutions. The phantom enables initial testing, helps detect implementation errors, and supports quantitative evaluation of new dynamic acquisition and reconstruction methods. It is formed from a series of superellipsoids using the constructive solid geometry technique and serves as a schematic representation of a human torso, including the lungs, liver, and stomach, as well as a four-chamber heart, major vessels, and simplified skeletal structures. This design allows full parameterization of voxel intensities and organ volumes. Respiratory and cardiac motions are modeled using built-in, decoupled signal generators. A high-performance, open-source reference implementation was developed in Julia and is available both as a library and a standalone console application. The phantom's capabilities were demonstrated through four experiments. The difference between the input and measured lung volumes was quantified, yielding a maximum relative error of 5.5% and a median error of 2.5%. The relative error of the cardiac chamber volumes ranged from 1.76% to 3.67%. Performance was benchmarked across multiple phantom sizes and thread counts, and a realistic Cartesian MRI simulation demonstrated how the phantom can be used to quantify motion blur and artifacts. The proposed dynamic geometric phantom provides an intermediate option between simple static phantoms and complex, proprietary, anatomically realistic 4D models. It provides a highly customizable, easy-to-use, open-source tool for researchers developing new reconstruction algorithms, and it can be easily integrated into existing reconstruction pipelines.

Indexed as

Image Interpretation, Computer-AssistedImage Processing, Computer-AssistedMagnetic Resonance ImagingPhantoms, ImagingTomography, X-Ray ComputedAlgorithmsEquipment DesignHumansReproducibility of ResultsSensitivity and Specificityconstructive solid geometryCTdynamic phantomJuliaMRIShepp–Logan

Identifiers

PMID42397113
PMCPMC13527270

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.