Evidence map›Paper›PMID 42393866›Full record

ReviewMicrobiologyOpen2026

De novo or Salvage? Nucleotide Availability as a Driver of Bacterial Adaptation and Virulence.

Riya Joshi, Alastair G McEwan, Ulrike Kappler

Abstract readReview
In one paragraph

Review in MicrobiologyOpen, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Riya JoshiSchool of Chemistry and Molecular Biosciences, The University of Queensland, St. Lucia, QLD, Australia.ORCID https://orcid.org/0000-0002-3433-8136
Alastair G McEwanSchool of Chemistry and Molecular Biosciences, The University of Queensland, St. Lucia, QLD, Australia.
Ulrike KapplerSchool of Chemistry and Molecular Biosciences, The University of Queensland, St. Lucia, QLD, Australia.ORCID https://orcid.org/0000-0002-2642-1319

Funding

National Health & Medical Research Council (NHMRC) 2019058
6 · The paper itself

Abstract

Bacterial pathogens rely on the constant availability of purine and pyrimidine nucleotides to facilitate replication, growth, and virulence and to sustain energy metabolism and nucleotide-based signaling. The capacity to switch between de novo synthesis and salvage pathways underpins much of their metabolic flexibility and also regulates access to different human body niches, where nucleobase availability varies significantly between extracellular fluids, mucosal surfaces, inflamed tissues, and intracellular compartments. However, adaptation to specific host niches can result in the loss of de novo nucleotide biosynthesis pathways, increasing bacterial dependence on nucleobase/nucleoside salvage. Many intracellular pathogens lack de novo synthesis pathways, making purine or pyrimidine salvage not an optional, but an essential process where host nucleotide reserves are critical to bacterial survival. Because of their central role in bacterial metabolism, enzymes, transporters, and regulatory networks involved in purine and pyrimidine metabolism represent potential targets for therapeutic interventions. This review summarizes the current knowledge of purine and pyrimidine metabolism in bacterial pathogens, including the abundance of these compounds in different host niches, tissue-specific fitness strategies, and bacterial targets for further development of innovative antibacterials.

Indexed as

Adaptation, PhysiologicalBacteriaNucleotidesPyrimidine NucleotidesHumansMetabolic Networks and PathwaysPurinesPyrimidinesVirulenceNucleotidesPurinesPyrimidine NucleotidesPyrimidinesbiosynthesisde novo pathwaynucleotide metabolismpurinepyrimidinesalvage pathway

Identifiers

PMID42393866
PMCPMC13328217

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.