Evidence map›Paper›PMID 42385052›Full record

ArticlePlant physiology2026

A genome-scale metabolic model of a pathosystem sheds light on bacterial wilt.

Léo Gerlin, Stéphane Genin, Caroline Baroukh

Abstract read
In one paragraph

Article in Plant physiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Léo GerlinUniv Toulouse, INRAE, CNRS, LIPME, Auzeville CS 52627 31326 Castanet-Tolosan, France.ORCID 0000-0002-1398-2790
Stéphane GeninUniv Toulouse, INRAE, CNRS, LIPME, Auzeville CS 52627 31326 Castanet-Tolosan, France.ORCID 0000-0003-2498-2400
Caroline BaroukhUniv Toulouse, INRAE, CNRS, LIPME, Auzeville CS 52627 31326 Castanet-Tolosan, France.ORCID 0000-0002-1041-1730

Funding

French Laboratory of Excellence (LABEX) ANR-10-LABX-41French Laboratory of Excellence (LABEX) ANR11-IDEX-0002-02French Ministry of National Education and ResearchFrench National Research Agency ANR-24-CE20-0519
6 · The paper itself

Abstract

During plant infection, complex metabolic interactions occur between the host and the pathogen, including direct competition for resources. While pathogens exploit host-derived nutrients to sustain growth and virulence, plants attempt to restrict pathogen proliferation by limiting nutrient availability. To quantify the contribution of these trophic interactions to disease development, we developed a mathematical model of plant-pathogen metabolism. A genome-scale metabolic model of the pathogen was integrated with a genome-scale, multiorgan metabolic model of the plant and calibrated using experimental data. Model simulations were performed using a sequential flux balance analysis framework. This approach was applied to the Ralstonia pseudosolanacearum-tomato (Solanum lycopersicum) pathosystem. Quantitative fluxes of matter occurring during plant infection were predicted. The model shows that (i) plant photosynthetic capacity imposes a stronger constraint on bacterial proliferation than mineral availability; (ii) infection-induced reduction in plant transpiration first limits plant growth and subsequently restricts pathogen expansion; (iii) stem resource hijacking enhances bacterial growth but is likely limited; and (iv) pathogen-excreted putrescine is likely reutilized for the plant's needs. Together, these results provide a quantitative assessment of resource competition in plant-pathogen interactions and highlight the central role of water flow during infection by a fast-growing, xylem-colonizing bacterium.

Indexed as

Host-Pathogen InteractionsModels, BiologicalPlant DiseasesRalstoniaSolanum lycopersicumPhotosynthesis

Identifiers

PMID42385052
PMCPMC13464506

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.