Evidence map›Paper›PMID 42380687›Full record

ReviewCrop health2026

Regulatory role of epigenetics in rice immunity against bacterial and fungal pathogens.

Gulmeena Shah, Habib Ullah, Lin Chen, Amir Zaman Shah, Rozina Shaheen, Jinglan Liu, Weiwen Kong

Abstract readReview
In one paragraph

Review in Crop health, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Gulmeena ShahCollege of Plant Protection, Yangzhou University, Yangzhou, Jiangsu, China.ORCID http://orcid.org/0000-0001-8632-6092
Habib UllahJoint International Research Laboratory of Agricultural & Agri-Product Safety, Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, The Ministry of Education of China, Yangzhou University, Yangzhou, Jiangsu, China.
Lin ChenCollege of Plant Protection, Yangzhou University, Yangzhou, Jiangsu, China.
Amir Zaman ShahCollege of Plant Protection, Yangzhou University, Yangzhou, Jiangsu, China.
Rozina ShaheenCollege of Plant Protection, Yangzhou University, Yangzhou, Jiangsu, China.
Jinglan LiuCollege of Plant Protection, Yangzhou University, Yangzhou, Jiangsu, China. liujl@yzu.edu.cn.
Weiwen KongCollege of Plant Protection, Yangzhou University, Yangzhou, Jiangsu, China. wwkong@yzu.edu.cn.ORCID http://orcid.org/0000-0002-5372-7110

Funding

National Natural Science Foundation of China 32202318
6 · The paper itself

Abstract

Rice (Oryza sativa), a major crop, faces significant threats from various pathogens, which affect global food security. Recent research in plant biology highlights the crucial role of epigenetic mechanisms in regulating rice immunity. Epigenetics involves heritable changes in gene expression without alterations to the DNA sequence, mediated by DNA methylation, histone modifications, and non-coding RNAs. This review critically evaluates the role of epigenetics in rice immunity, focusing on key epigenetic modifications and their impact on disease resistance, including WRKY transcription factors and epigenetic regulatory factors, such as RdDM (RNA-directed DNA methylation). These epigenetic regulators enable rice plants to dynamically withstand pathogen attacks by modulating the expression of defense-related genes. This review evaluates the epigenetic responses of rice to major pathogens, including Magnaporthe oryzae (M. oryzae) and Xanthomonas oryzae (Xoo). We move beyond simple descriptions of epigenetic marks to analyze the functional integration of these pathways and their trade-offs with plant growth. Finally, we discuss the potential of "epigenetic breeding" and CRISPR-based epi-editing as a sustainable frontier for developing broad-spectrum resistance in rice. Future research should focus on identifying specific epigenetic markers associated with resistance traits and integrating epigenetic approaches with traditional breeding and biotechnological methods to achieve sustainable rice production and ensure food security in the face of evolving pathogen threats.

Indexed as

Disease resistanceDNA methylationEpigenetic regulationHistone modificationNon-coding RNAsRice immunity

Identifiers

PMID42380687
PMCPMC13319856

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.