Evidence map›Paper›PMID 42379884›Full record

ArticleThe Journal of animal ecology2026

Environmental factors associated with nesting habits and age shape the composition and connection between skin and uropygial gland microbiomes of birds.

Ester Martínez-Renau, Kasun H Bodawatta, Antonio M Martín-Platero, Manuel Martín-Vivaldi, María Dolores Barón, Cristina Ruiz-Castellano, Manuel Martínez-Bueno, Knud A Jønsson, Michael Poulsen, Juan José Soler

Abstract read
In one paragraph

Article in The Journal of animal ecology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ester Martínez-RenauDepartamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas (CSIC), Almería, Spain.ORCID https://orcid.org/0000-0002-4907-0929
Kasun H BodawattaNatural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.ORCID https://orcid.org/0000-0002-6095-9059
Antonio M Martín-PlateroDepartamento de Microbiología, Universidad de Granada, Granada, Spain.
Manuel Martín-VivaldiUnidad Asociada (CSIC): Coevolución: Cucos, Hospedadores y Bacterias Simbiontes, Universidad de Granada, Granada, Spain.ORCID https://orcid.org/0000-0002-5432-425X
María Dolores BarónDepartamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas (CSIC), Almería, Spain.ORCID https://orcid.org/0000-0002-0962-1685
Cristina Ruiz-CastellanoDepartamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas (CSIC), Almería, Spain.ORCID https://orcid.org/0000-0003-2548-3881
Manuel Martínez-BuenoDepartamento de Microbiología, Universidad de Granada, Granada, Spain.
Knud A JønssonNatural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.ORCID https://orcid.org/0000-0002-1875-9504
Michael PoulsenSection for Ecology and Evolution, Department of Biology, University of Copenhagen, Copenhagen, Denmark.
Juan José SolerDepartamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas (CSIC), Almería, Spain.ORCID https://orcid.org/0000-0003-2990-1489

Funding

Ministerio de Ciencia e Innovación/Agencia Estatal de Investigación CGL2017-83103-PMinisterio de Ciencia e Innovación/Agencia Estatal de Investigación PID2020-117429GB-C21Ministerio de Ciencia e Innovación/Agencia Estatal de Investigación PID2020-117429GB-C22Ministerio de Ciencia e Innovación/Agencia Estatal de Investigación PID2024-159017NB-C31Ministerio de Ciencia e Innovación/Agencia Estatal de Investigación PID2024-159017NB-C32Ministerio de Ciencia e Innovación/Agencia Estatal de Investigación PRE2018-085378
6 · The paper itself

Abstract

Bacterial communities on skin and feathers can act as a critical line of defence against pathogenic infections in birds and may originate from secretions produced by the uropygial gland. These secretions reach the bird integument during preening, with the preening effort possibly determining the connectivity between uropygial gland and integument microbiomes. The risk of pathogen infections depends on a number of variables, including environmental conditions (i.e. temperature and humidity), species identity, life-history traits (i.e. cavity vs. open-cup nesters) and life stage (i.e. age). Bacterial symbionts of the host, particularly those of the uropygial gland, may counter such pathogenic infections. We therefore hypothesise that bacterial communities of the uropygial gland differ among host species, age and nesting habits, with higher bacterial diversity in nestlings due to their immature immune system, and in cavity nesters due to potentially increased pathogen exposure. We examined this using 16S rRNA metabarcoding of bacterial communities of the uropygial secretion (N = 352) and uropygial gland skin (N = 339) of nestlings and adults of 26 bird species from 14 families in southern Spain. In accordance with the hypotheses, we find species-specific differences in bacterial communities of uropygial gland skin and secretion, as well as an effect of age, with nestlings showing a higher bacterial diversity, especially in the uropygial gland skin. Additionally, the microbiotas of cavity-nesting species are more diverse and heterogeneous than those of open nesters, with these effects more pronounced in adult and uropygial secretions. Finally, the uropygial gland is relatively larger in cavity- than in open-nester species, which suggests that cavity nesters preen more often than the open nesters. Moreover, we found a stronger sharing of secretion and skin microbes in cavity nesters and nestlings compared to adults and open nesters. Overall, our findings on the effects of age and nest type on structuring bird uropygial gland skin and secretion microbiota imply that age and pathogen risks related to nest environment could drive the external microbiome assembly in birds.

Indexed as

BirdsMicrobiotaNesting BehaviorSkinAge FactorsAnimalsBacteriaEnvironmentFemaleRNA, Ribosomal, 16SSkin MicrobiomeSpainRNA, Ribosomal, 16Santimicrobial defencesavian microbiomecavity nestingpathogen exposuresymbiotic bacteriauropygial gland secretion

Identifiers

PMID42379884
PMCPMC13439605

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.