Evidence map›Paper›PMID 42373647›Full record

ArticleNature communications2026

The structural mechanism of HIV-2 Vif antagonism of human APOBEC3H.

Yange Niu, Michelle Lilly, Estelle K Ronayne, Michael Emerman, Nicholas M Chesarino, John D Gross

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yange NiuDepartment of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0003-1092-8972
Michelle LillyDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Center, Seattle, WA, USA.ORCID http://orcid.org/0009-0007-4549-316X
Estelle K RonayneDepartment of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-7422-1872
Michael EmermanDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Center, Seattle, WA, USA.
Nicholas M ChesarinoDepartment of Biology, University of Akron, Akron, OH, USA.
John D GrossDepartment of Pharmaceutical Chemistry, University of California San Francisco, San Francisco, CA, USA. jdgross@cgl.ucsf.edu.ORCID http://orcid.org/0000-0002-1377-4705

Funding

Project 3U54AI170792 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Nevan J Krogan · 2022 to 2026
$35.7M
NIAID NIH HHS U54 AI170792
6 · The paper itself

Abstract

Human APOBEC3 (A3) proteins restrict retrovirus infection by inducing hypermutations in viral cDNA. To counteract this restriction, lentiviruses, such as HIV-1 and HIV-2 encode the viral infectivity factor (Vif), which hijacks a host Cullin-RING E3 ubiquitin ligase complex to target A3 proteins for proteasomal degradation. Here, we present the cryo-EM structure of HIV-2 Vif in complex with human A3H and CBFβ. The structure reveals that A3H forms a dimer mediated by dsRNA where each A3H monomer directly interacts with an HIV-2 Vif and the host protein CBFβ. Both HIV-2 Vif-A3H and CBFβ-A3H interfaces are critical for A3H degradation. Notably, however, the HIV-2 Vif-A3H interface is entirely distinct from the previously determined cryo-EM structure of the HIV-1 Vif and A3H complex. These findings suggest that HIV-1 and HIV-2 Vif, which are the result of distinct cross-species transmissions from species with different A3H characteristics, have followed separate evolutionary trajectories to counteract human A3H.

Indexed as

AminohydrolasesHIV-2vif Gene Products, Human Immunodeficiency VirusCore Binding Factor beta SubunitCryoelectron MicroscopyHumansModels, MolecularProtein BindingRNA, Double-StrandedAminohydrolasesAPOBEC3H protein, humanCore Binding Factor beta SubunitRNA, Double-Strandedvif Gene Products, Human Immunodeficiency Virusvif protein, Human immunodeficiency virus 2

Identifiers

PMID42373647
PMCPMC13454587

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.