Evidence map›Paper›PMID 42367889›Full record

ArticlebioRxiv : the preprint server for biology2026

Environmental microbial extracts for longitudinal studies of gut microbiome assembly and maintenance.

Rahul Bodkhe, Rebecca Choi, Michael Shapira

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Rahul BodkheDepartment of Integrative Biology, University of California, Berkeley, CA, USA.ORCID 0000-0002-7902-3357
Rebecca ChoiDepartment of Integrative Biology, University of California, Berkeley, CA, USA.
Michael ShapiraDepartment of Integrative Biology, University of California, Berkeley, CA, USA.

Funding

The role of the gut microbiome in host adaptation to environmental xenobiotics - mechanisms and long-term consequencesR01ES034012 · NIEHS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Michael Shapira · 2022 to 2026
$1.8M
Age-dependent changes in gut microbiota composition and their significance for host agingR01AG061302 · NIA · UNIVERSITY OF CALIFORNIA BERKELEY · PI SHAPIRA, MICHAEL · 2019 to 2023
$1.6M
NIA NIH HHS R01 AG061302NIEHS NIH HHS R01 ES034012
6 · The paper itself

Abstract

Animals harbor diverse gut microorganisms that influence host health and fitness. Synthetic microbial communities have been instrumental in enabling reductionist studies of host-microbiome interactions, but some questions require microbial communities with more natural-like complexity while preserving experimental tractability,

Indexed as

Caenorhabditis elegansecologymicrobiomesynthetic communities

Identifiers

PMID42367889
PMCPMC13308033

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.