Evidence map›Paper›PMID 42363855›Full record

ArticleMicrobiology resource announcements2026

Metagenome-assembled genomes recovered from the gut microbiomes of simian immunodeficiency virus-infected rhesus macaques.

Eric Q Pham, Christopher A Gaulke, Jonathan A Eisen, Satya Dandekar

Abstract read
In one paragraph

Article in Microbiology resource announcements, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Eric Q PhamDepartment of Medical Microbiology and Immunology, University of California, Davis, Davis, California, USA.ORCID 0009-0005-9320-3601
Christopher A GaulkeDepartment of Pathobiology, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.ORCID 0000-0001-7741-7822
Jonathan A EisenDepartment of Medical Microbiology and Immunology, University of California, Davis, Davis, California, USA.ORCID 0000-0002-0159-2197
Satya DandekarDepartment of Medical Microbiology and Immunology, University of California, Davis, Davis, California, USA.ORCID 0000-0002-6346-8028

Funding

National Institute on Aging (NIA) ColonyP51OD011107 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Simon J. Atkinson · 2012 to 2026
$191.5M
"Corral and Kill" strategy for HIV eradication using MSC in an SIV modelR37AI153025 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Satya Dandekar · 2020 to 2026
$5.3M
Defining the impact of developmental herbicide exposures on gut microbiome physiology and interactions with healthR01ES036174 · NIEHS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI Christopher A Gaulke · 2025 to 2026
$1.3M
Acquisition of Covaris E220 and Sciclone G3 systems for high throughput sequencinS10OD010786 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI COMAI, LUCA · 2012 to 2012
$311k
National Institute of Allergy and Infectious Diseases AI 153025NIAID NIH HHS R37 AI153025NIEHS NIH HHS R01 ES036174NIH HHS P51 OD011107NIH HHS S10 OD010786NIH Office of the Director ES036174ODCDC CDC HHS P51 OD011107
6 · The paper itself

Abstract

Rhesus macaques are widely used model organisms for studying human biology, yet relatively few metagenome-assembled genomes (MAGs) are available from their microbiome. Here, we report 159 MAGs recovered from simian immunodeficiency virus-infected macaques, including those treated either with antiretroviral therapy or 10-hydroxystearic acid.

Indexed as

gut microbiomemetagenome-assembled genomesrhesus macaque

Identifiers

PMID42363855
PMCPMC13348373

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.