Evidence map›Paper›PMID 42363425›Full record

ArticleJournal of fish diseases2026

A Two-Step PCR Workflow Reveals Predominance of Flavobacterium covae in Ornamental Fish With Clinical Signs of Columnaris Disease.

Pedro Henrique Magalhães Cardoso, Emy Yano, Simone de Carvalho Balian, André Pegoraro Poor, Kawany Miyazaki Araujo, Marianna Vaz Rodrigues, Andrea Micke Moreno

Abstract read
In one paragraph

Article in Journal of fish diseases, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Pedro Henrique Magalhães CardosoDepartment of Preventive Veterinary Medicine and Animal Health, School of Veterinary Medicine and Animal Science, University of São Paulo, São Paulo, Brazil.ORCID https://orcid.org/0000-0001-8387-0121
Emy YanoDepartment of Preventive Veterinary Medicine and Animal Health, School of Veterinary Medicine and Animal Science, University of São Paulo, São Paulo, Brazil.
Simone de Carvalho BalianDepartment of Preventive Veterinary Medicine and Animal Health, School of Veterinary Medicine and Animal Science, University of São Paulo, São Paulo, Brazil.
André Pegoraro PoorDepartment of Preventive Veterinary Medicine and Animal Health, School of Veterinary Medicine and Animal Science, University of São Paulo, São Paulo, Brazil.
Kawany Miyazaki AraujoDepartment of Preventive Veterinary Medicine and Animal Health, School of Veterinary Medicine and Animal Science, University of São Paulo, São Paulo, Brazil.
Marianna Vaz RodriguesInstitute of Biotechnology, São Paulo State University "Júlio de Mesquita Filho", Botucatu, Brazil.
Andrea Micke MorenoDepartment of Preventive Veterinary Medicine and Animal Health, School of Veterinary Medicine and Animal Science, University of São Paulo, São Paulo, Brazil.ORCID https://orcid.org/0000-0002-3290-566X

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 312684/2022-3Coordenação de Aperfeiçoamento de Pessoal de Nível Superior 88887.078833/2024-00Coordenação de Aperfeiçoamento de Pessoal de Nível Superior Finance Code 001
6 · The paper itself

Abstract

Columnaris is an important bacterial disease of freshwater fish and is increasingly recognised as being caused by a species complex historically referred to as Flavobacterium columnare. A two-step molecular workflow was applied to ornamental fish with clinical signs of columnaris disease from a multispecies commercial distributor operating a shared recirculating system in São Paulo, Brazil. Skin and fin lesion scrapings were Gram stained, and lesion-derived tissue DNA was screened by ISR-PCR for the columnaris disease complex. ISR-PCR yielded the expected amplicon in 61/123 samples (49.6%) from 28 ornamental fish species. All ISR-PCR-positive samples were then analysed by multiplex PCR for species assignment. Group-specific amplicons were obtained from 29/61 samples (47.5%): Flavobacterium covae in 27/61 (44.3%) and F. davisii in 2/61 (3.3%); no GG1 or GG4 amplicons were detected. The remaining 32/61 samples (52.5%) were not typeable by multiplex PCR. These findings provide baseline species-level data and support combined molecular surveillance in multispecies ornamental fish systems.

Indexed as

Fish DiseasesFlavobacteriaceae InfectionsFlavobacteriumPolymerase Chain ReactionAnimalsBrazilFishesMultiplex Polymerase Chain Reactioncolumnaris diseaseFlavobacterium covaeFlavobacterium davisiimultiplex PCRornamental fish

Identifiers

PMID42363425
PMCPMC13629458

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.