Evidence map›Paper›PMID 42360550›Full record

ArticleEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2026

A qPCR identification scheme to differentiate actinomycetoma from eumycetoma.

Sahar Bakhiet, Emmanuel Siddig, Carole Pab Minlekib, Rihab Mohammed, Willemien Zandijk, Andrew K Watson, Mickey Konings, Ahmed Fahal, Maguette Faye, Fatehmeh Mazraati Tajabadi and 3 more

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Article in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sahar Bakhiet *Department of Medical Microbiology and Infectious Diseases, ErasmusMC, Dr. Molewaterplein 40, 3015 GD, Rotterdam, Netherlands.ORCID http://orcid.org/0000-0003-0266-5180
Emmanuel Siddig *Department of Medical Microbiology and Infectious Diseases, ErasmusMC, Dr. Molewaterplein 40, 3015 GD, Rotterdam, Netherlands.ORCID http://orcid.org/0000-0001-6314-7374
Carole Pab MinlekibCentre de Recherche sur les maladies Tropicales Négligées, UFR Sciences de la Santé, Université Gaston Berger, Saint-Louis, Senegal.
Rihab MohammedDepartment of Medical Microbiology and Infectious Diseases, ErasmusMC, Dr. Molewaterplein 40, 3015 GD, Rotterdam, Netherlands.
Willemien ZandijkDepartment of Medical Microbiology and Infectious Diseases, ErasmusMC, Dr. Molewaterplein 40, 3015 GD, Rotterdam, Netherlands.ORCID http://orcid.org/0009-0006-9171-4464
Andrew K WatsonCentre for Bacterial Cell Biology, Biosciences Institute, Newcastle University, Newcastle upon Tyne, UK.
Mickey KoningsDepartment of Medical Microbiology and Infectious Diseases, ErasmusMC, Dr. Molewaterplein 40, 3015 GD, Rotterdam, Netherlands.ORCID http://orcid.org/0000-0003-3983-4304
Ahmed FahalMycetoma Research Centre, University of Khartoum, Khartoum, Sudan.ORCID http://orcid.org/0000-0003-4922-7321
Maguette FayeCentre de Recherche sur les maladies Tropicales Négligées, UFR Sciences de la Santé, Université Gaston Berger, Saint-Louis, Senegal.
Fatehmeh Mazraati TajabadiFaculty of Medicine and Health, University of Sydney, Sydney, NSW, 2015, Australia.
Jeffrey ErringtonCentre for Bacterial Cell Biology, Biosciences Institute, Newcastle University, Newcastle upon Tyne, UK.ORCID http://orcid.org/0000-0002-6977-9388
Doudou SowCentre de Recherche sur les maladies Tropicales Négligées, UFR Sciences de la Santé, Université Gaston Berger, Saint-Louis, Senegal.ORCID http://orcid.org/0000-0002-0560-2372
Wendy W J van de SandeDepartment of Medical Microbiology and Infectious Diseases, ErasmusMC, Dr. Molewaterplein 40, 3015 GD, Rotterdam, Netherlands. w.vandesande@erasmusmc.nl.ORCID http://orcid.org/0000-0002-8652-8783

Funding

Stichting Dioraphte 21030402
6 · The paper itself

Abstract

backgroundMycetoma is a Neglected Tropical Disease of the skin. It is characterized by large tumorous lesions in the subcutaneous tissue which hinder the patients in their daily activities. The disease can be caused by either bacteria (actinomycetoma) or fungi (eumycetoma), and treatment depends on the entity. Therefore, in 2022, a Target Product Profile was published by the World Health Organisation in which it was stated that there is an urgent need to develop a diagnostic tool that can differentiate the two reliably within a day.

objectivesTo develop a qPCR that can not only differentiate actinomycetoma from eumycetoma but can also identify the actinomycetoma causative agents to the genus level.

methodsWe developed singleplex, quadruplex and triplex qPCRs that can be used, depending on the endemic region and validated this against a large strain collection and grains.

resultsThe limit of detection (LOD) of each of the probes ranged from 0.000002 ng for the fungal probe to 0.002 ng for the Nocardia genus probe in a singleplex reaction. Higher LODs were obtained in the multiplexes. The sensitivity and specificity were both 100% for most combinations, although some cross-reactivity with the Actinomadura and Streptomyces genus probes was noted, mainly with non-mycetoma causative agents.

conclusionThe developed qPCR meets the requirements set in the Target Product Profile from the World Health Organisation. IMPORTANCE: In this study a qPCR is developed which can differentiate actinomycetoma from eumycetoma and identify actinomycetoma causative agents to the genus level. This qPCR adheres to the minimal requirements set in the Target Product Profile for a mycetoma diagnostic test by the World Health Organisation. When the qPCR is used on mycetoma grain it reduces the time to identification to only a few hours. With hand-held qPCRs this can also be performed in the field.

Indexed as

ActinomycetomaDiagnosticsEpidemiologyEumycetomaMycetomaqPCRTarget product profile

Identifiers

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.