Evidence map›Paper›PMID 42350954›Full record

ArticleBMC plant biology2026

Genetic and metabolite diversity of Sundaland Heptapleurum (Araliaceae) insight into evolutionary and specialized metabolite.

Faizal Maulana, Nur Kholilatul Izzah, Hyeji Lee, Jee Young Park, Jong-Soo Kang, Yun Sun Lee, Yeon Jeong Kim, Waras Nurcholis, Tae-Jin Yang

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Article in BMC plant biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

9 authors.

Faizal MaulanaDepartment of Agriculture, Forestry and Bioresources, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
Nur Kholilatul IzzahResearch Center for Estate Crops, Research Organization for Agriculture and Food, National Research and Innovation Agency, Jakarta, Indonesia.
Hyeji LeeDepartment of Agriculture, Forestry and Bioresources, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
Jee Young ParkDepartment of Agriculture, Forestry and Bioresources, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
Jong-Soo KangDepartment of Forest Resources, College of Forest and Environmental Sciences, Kangwon National University, Chuncheon, Republic of Korea.
Yun Sun LeeCrop Biotechnology Institute, Institutes of Green-BioScience and Technology, Seoul National University, Pyeongchang, Republic of Korea.
Yeon Jeong KimCrop Biotechnology Institute, Institutes of Green-BioScience and Technology, Seoul National University, Pyeongchang, Republic of Korea.
Waras NurcholisDepartment of Biochemistry, Faculty of Mathematics and Natural Sciences, IPB University, Bogor, Indonesia. wnurcholis@apps.ipb.ac.id.
Tae-Jin YangDepartment of Agriculture, Forestry and Bioresources, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea. tjyang@snu.ac.kr.ORCID https://orcid.org/0000-0002-9676-8801

Funding

National Research Foundation of Korea RS-2025-02216304
6 · The paper itself

Abstract

backgroundThe genus Heptapleurum Gaertn (previously treated as Schefflera J.R.Forst. & G.Forst.) within the Araliaceae family is recognized for its significant medicinal value and complex taxonomy. However, an integrated understanding of its evolutionary and metabolite diversity remains unexplored, especially in the Sundaland region (i.e., Java and Sumatra). Here, we integrate genomics and metabolomics to unravel the evolutionary relationships and metabolite diversity of 10 Heptapleurum species from Sundaland.

resultsWe assembled 10 new complete plastid genomes (plastomes) and 45S nuclear ribosomal DNA (nrDNA) sequences, identifying significant variation and potential key molecular markers. Metabolomics identified 152 metabolites, mainly phenolics and terpenoids. Metabolite profiles of H. rhynchocarpum and H. capituliferum were more correlated with phylogeny than with geography; these two species were separate from the main Heptapleurum clade. Four species, H. farinosum, H. longifolium, H. rigidum, and H. fastigiatum, have almost identical plastomes and 45S nrDNA structures, suggesting they may represent closely related species with different phenotypes, as evidenced by distinctive metabolite compositions.

conclusionsCrucially, there is an incongruence between the genetic and chemical phylogenies, underscoring that while chemotaxonomy reflects functional diversity, genetic data remains the definitive standard for evolutionary inference, with the potential for reclassifying H. rhynchocarpum and H. capituliferum. This study provides a foundation for future taxonomic revisions, conservation, and drug discovery of Heptapleurum.

Indexed as

Genetic VariationMetabolomeBiological EvolutionEvolution, MolecularGenome, PlastidMetabolomicsPhylogenyEvolutionaryGenomicsHeptapleurumMetabolomicsSundaland

Identifiers

PMID42350954
PMCPMC13555951

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