Evidence map›Paper›PMID 42346032›Full record

ReviewEpigenomes2026

5mC and 6mA DNA Methylation in the Fungal Kingdom: From Genome Defense to Epigenetic Regulation.

Daniil P Malyshev, Vasiliy V Belov, Elizaveta S Gromova, Andrey A Eremin, Maria I Zvereva, Alexander V Sergeev

Abstract readReview
In one paragraph

Review in Epigenomes, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Daniil P MalyshevFaculty of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.
Vasiliy V BelovFaculty of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.
Elizaveta S GromovaFaculty of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.ORCID 0000-0001-9086-7238
Andrey A EreminFaculty of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.
Maria I ZverevaFaculty of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.ORCID 0000-0002-7432-1574
Alexander V SergeevFaculty of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russia.ORCID 0000-0002-0479-6910

Funding

Russian Science Foundation 25-74-00071
6 · The paper itself

Abstract

DNA methylation, the covalent addition of methyl groups to cytosine (5mC) or adenine (6mA) in DNA, is a fundamental mechanism of epigenetic inheritance conserved from bacteria to humans. Fungi provide a uniquely informative window into the evolutionary logic of methylation systems. Spanning more than 1 billion years of diversification, the kingdom encompasses species that have lost cytosine methylation entirely, lineages that use 5mC to silence transposons and drive the irreversible genome-defense process known as repeat-induced point mutation (RIP), and early-diverging lineages, in which 6mA has emerged as a prominent chromatin mark. The methyltransferases underlying these strategies (DIM-2, RID, DNMT1-RFD, DNMT5, and the MT-A70 complex) and the recently characterized demethylases Dmt1 and CcTet are structurally and mechanistically distinct from their mammalian counterparts. Here we review the mechanisms, targets, and biological functions of fungal DNA methyltransferases and demethylases, incorporating cryo-EM structural insights into DIM-2 and DNMT5 catalysis, analyses of DNMT gene loss as a continuous evolutionary process, the antiviral role of DIM-2 in vegetative hyphae, and the emerging model of 6mA as a heritable regulatory mark in early-diverging lineages. By integrating these advances, this review offers the updated and comprehensive account of DNA methylation across fungi.

Indexed as

5-methylcytosineDNA methylationfungal epigenomicsN6-methyladeninerepeat-induced point mutation

Identifiers

PMID42346032
PMCPMC13297926

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.