ArticleApplications in plant sciences
Off-target metagenomics: Leveraging whole genome sequencing to study the bacteriome of the liverwort
Article in Applications in plant sciences. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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1 citing paper in PubMed.
- Off-target metagenomics: Leveraging whole genome sequencing to study the bacteriome of the liverwortApplications in plant sciencesArticle
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4 authors.
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Abstract
Premise: The recovery of non-target organism reads, especially when whole organisms are sampled, constitutes a great opportunity for studying microbial communities. The increase in whole genome sequencing feasibility and the development of new marker-based pipelines enable the use of short reads to study bacterial communities associated with organisms. Methods: We utilized population genomic data of the liverwort Results: The bacterial communities associated with Discussion: Our results support previous observations that liverwort bacterial communities are not randomly assembled, suggesting a potential role of the plant in determining community composition, an emerging pattern that deserves more attention. The novel off-target metagenomics approach can be applied to any population-level resequencing where whole organisms are sequenced, opening the door to exciting avenues of microbiome research using repurposed data from landscape genomics.
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