Evidence map›Paper›PMID 42342985›Full record

ArticleScientific data2026

A chromosome-level genome assembly of the Fusarium oxysporum biocontrol strain FO12.

Andrea Doddi, Ana López-Moral, Hayley Mangelson, Antonio Di Pietro, Carlos Agustí-Brisach

Abstract readDataset
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Andrea DoddiDepartment of Genetics, University of Córdoba, Campus de Rabanales, Córdoba, 14014, Spain. adoddi@uco.es.
Ana López-MoralDepartment of Agronomy, University of Córdoba, Campus de Rabanales, Córdoba, 14014, Spain.
Hayley MangelsonPhase Genomics, Inc., Seattle, WA, 98109, USA.
Antonio Di PietroDepartment of Genetics, University of Córdoba, Campus de Rabanales, Córdoba, 14014, Spain. ge2dipia@uco.es.
Carlos Agustí-BrisachDepartment of Agronomy, University of Córdoba, Campus de Rabanales, Córdoba, 14014, Spain. cagusti@uco.es.

Funding

Spanish Ministry of Science, Innovation and Universities, and the Spanish Research Agency PID2021-123645OA-I00 'BIOLIVE'Spanish Ministry of Science, Innovation and Universities, and the Spanish Research Agency PID2022-140187OB-I00
6 · The paper itself

Abstract

Fusarium oxysporum FO12 was originally isolated from cork oak (Quercus suber L.) and has been characterised as a highly effective biological control agent of wilt diseases on different crops. FO12 endophytically colonises roots and basal stems of plants, reducing the establishment of the soil-borne pathogen Verticillium dahliae and triggering plant defence-related genes. Here, we report a chromosome-level genome assembly of FO12 using Nanopore and Hi-C data. The 57.60 Mb assembly comprises 14 chromosome-scale scaffolds with centromeres resolved and telomeric repeats detected at 4 of 28 chromosome ends. This high-quality reference genome provides a valuable resource for further research into the use of FO12 in agriculture as a biocontrol agent.

Indexed as

Chromosomes, FungalFusariumGenome, Fungal

Identifiers

PMID42342985
PMCPMC13677680

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.