Evidence map›Paper›PMID 42337725›Full record

ArticleBMC genomics2026

Supplementation with effective microorganisms in earthen ponds affects common carp growth and abundance of specific bacterial families.

Michalina Jakimowicz, Katarzyna Sidorczuk, David Huyben, Falk Hildebrand, Łukasz Napora-Rutkowski, Piotr Hajduk, Marek Sztuka, Magda Mielczarek, Dawid Słomian, Laura Jarosz and 1 more

Abstract read
In one paragraph

Article in BMC genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Michalina JakimowiczDepartment of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, Wroclaw, 51-631, Poland.ORCID http://orcid.org/0000-0001-8149-3860
Katarzyna SidorczukDepartment of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, Wroclaw, 51-631, Poland.ORCID http://orcid.org/0000-0001-6576-9054
David HuybenDepartment of Animal Biosciences, University of Guelph, 50 Stone Road East Guelph, Guelph, ON, N1G 2W1, Canada.ORCID http://orcid.org/0000-0001-7913-851X
Falk HildebrandQuadram Institute, Norwich Research Park, Norwich, NR4 7UQ, UK.ORCID http://orcid.org/0000-0002-0078-8948
Łukasz Napora-RutkowskiInstitute of Ichthyobiology and Aquaculture, Polish Academy of Sciences, Kalinowa 2, Chybie, 43-520, Poland.ORCID http://orcid.org/0000-0002-4891-910X
Piotr HajdukDepartment of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, Wroclaw, 51-631, Poland.ORCID http://orcid.org/0009-0008-0323-7376
Marek SztukaDepartment of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, Wroclaw, 51-631, Poland.ORCID http://orcid.org/0009-0005-6596-290X
Magda MielczarekDepartment of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, Wroclaw, 51-631, Poland.ORCID http://orcid.org/0000-0002-1086-9119
Dawid SłomianDepartment of Cattle Breeding, National Research Institute of Animal Production, 1 Krakowska Street, Balice, 32-083, Poland.ORCID http://orcid.org/0000-0002-9037-7703
Laura JaroszDepartment of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, Wroclaw, 51-631, Poland.ORCID http://orcid.org/0009-0004-5297-2407
Joanna SzydaDepartment of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, Wroclaw, 51-631, Poland. joanna.szyda@pwr.edu.pl.ORCID http://orcid.org/0000-0001-9688-0193

Funding

European Research Council erc-stg-948219Narodowe Centrum Nauki 2021/41/B/NZ9/01409Quadram Institute Bioscience BB/X011054/1
6 · The paper itself

Abstract

backgroundEffective microorganisms are increasingly explored in aquaculture to improve fish health and growth without leaving harmful residues. However, their efficacy in real-world pond environments remains poorly understood. Here, we conducted a 103-day field experiment to assess the effects of supplementation with two effective commercial microorganism products on the microbial communities and growth performance of common carp (Cyprinus carpio).

backgroundEffective microorganisms were added to the feed and directly to the pond water. Microbial diversity was analysed via 16 S rRNA and whole-genome shotgun sequencing across three environments: water (three time points), sediment (two time points), and fish intestine (one time point) from 25 experimental ponds. Bioinformatics processing was performed using the QIIME2 and MG-TK pipelines with taxonomic classification based on the SILVA database. The results showed that although supplemented bacterial families did not establish significantly in pond environments, fish exposed to specific effective microorganism treatments showed improved growth metrics.

conclusionsThese findings suggest that effective microorganisms can increase carp growth in aquaculture without significantly altering the resident microbial communities, suggesting a promising residue-free alternative to traditional additives in aquaculture.

Indexed as

BacteriaCarpsDietary SupplementsPondsAnimalsAquacultureMicrobiotaRNA, Ribosomal, 16SRNA, Ribosomal, 16S16S rRNAAquacultureGutMetatranscriptomeMicrobiomeSedimentWater

Identifiers

PMID42337725
PMCPMC13543649

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.