Evidence map›Paper›PMID 42334218›Full record

Observational studyMicrobiology spectrum2026

Comparison of Gram stain interpretation accuracy between a computer-aided diagnosis app and microbiology specialists in blood culture samples.

Kei Furui Ebisawa, Goh Ohji, Kei Yamamoto, Isao Miyatsuka, Ataru Moriya, Kenji Akamatsu, Hidetoshi Nomoto, Masami Kurokawa, Kenichiro Ohnuma, Mari Kusuki and 2 more

Abstract readComparative StudyObservational Study
In one paragraph

Observational study in Microbiology spectrum, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Kei Furui EbisawaDivision of Infectious Diseases Therapeutics, Department of Microbiology and Infectious Diseases, Kobe University Graduate School of Medicine, Kobe, Japan.ORCID 0000-0001-5654-366X
Goh OhjiDivision of Infectious Diseases Therapeutics, Department of Microbiology and Infectious Diseases, Kobe University Graduate School of Medicine, Kobe, Japan.ORCID 0000-0002-9947-020X
Kei YamamotoDisease Control and Prevention Center, National Center for Global Health and Medicine, Japan Institute for Health Security, Shinjuku City, Tokyo, Japan.
Isao MiyatsukaCarbGeM Inc., Tokyo, Japan.
Ataru MoriyaDepartment of Central Laboratory, National Center for Global Health and Medicine, Japan Institute for Health Security, Shinjuku City, Tokyo, Japan.
Kenji AkamatsuCarbGeM Inc., Tokyo, Japan.
Hidetoshi NomotoDisease Control and Prevention Center, National Center for Global Health and Medicine, Japan Institute for Health Security, Shinjuku City, Tokyo, Japan.
Masami KurokawaDepartment of Central Laboratory, National Center for Global Health and Medicine, Japan Institute for Health Security, Shinjuku City, Tokyo, Japan.
Kenichiro OhnumaDepartment of Clinical Laboratory, Kobe University Hospital, Kobe, Japan.
Mari KusukiDepartment of Clinical Laboratory, Kobe University Hospital, Kobe, Japan.
Yukari UemuraCenter for Clinical Sciences, National Center for Global Health and Medicine, Shinjuku City, Tokyo, Japan.
Norio OhmagariDisease Control and Prevention Center, National Center for Global Health and Medicine, Japan Institute for Health Security, Shinjuku City, Tokyo, Japan.

Funding

Japan Agency for Medical Research and Development JP23hk0102076
6 · The paper itself

Abstract

Gram staining is one of the basic tests to identify the organism in microbiological laboratory, especially in blood culture. However, microbiological specialists are not always available, which can lead to treatment delays. Therefore, we developed a computer-aided diagnosis (CAD) system that uses artificial intelligence to predict causative pathogens from Gram-stained blood culture images, focusing on both morphological (Class 1) and detailed (Class 2) classification. In this retrospective observational study, we compared the accuracy of predictions made by microbiology specialists (MS) and by CAD using iPhone-captured images of clinical samples stained with the Bartholomew and Mittwer method collected from two tertiary care hospitals between 1 October 2022 and 31 January 2023. Among 126 samples (378 images) for aerobic bottles (AE) and 90 samples (270 images) for anaerobic bottles (AN), the accuracy of MS and CAD prediction (95% confidence interval) was 91.5% (90.5%-92.3%) and 75.4% (70.7%-79.7%) for AE and 90.1% (88.9%-91.2%) and 76.7% (71.2%-81.6%) for AN, respectively. Although we could not demonstrate non-inferiority, most of the mispredictions occurred with Gram-negative cocci, IMPORTANCE: Gram staining of a positive blood culture is essential for early diagnosis and appropriate antibiotic selection, but interpretation requires trained specialists, limiting rapid reporting. While artificial intelligence (AI)-based automation has been explored, most previous studies either focused on a limited range of bacterial species or evaluated only the performance of the device itself. Also, most systems rely on bulky equipment. To address this, we developed a mobile device-based computer-aided diagnosis system for Gram stain interpretation and conducted a non-inferiority trial comparing its accuracy with that of microbiology specialists. Although non-inferiority was not demonstrated, we identified bacterial species that the AI system had difficulty distinguishing. With an appropriate understanding of these limitations, AI-assisted Gram stain interpretation could help reduce turnaround time and support timely clinical decision-making.

Indexed as

BacteriaBlood CultureDiagnosis, Computer-AssistedGentian VioletMobile ApplicationsPhenazinesArtificial IntelligenceHumansRetrospective StudiesSensitivity and SpecificityStaining and LabelingGentian VioletGram's stainPhenazinesartificial intelligenceblood culturecomputer-aided diagnosisGram stainingnon-inferiority trial

Identifiers

PMID42334218
PMCPMC13436423

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.