Evidence map›Paper›PMID 42333967›Full record

ArticleJournal of phycology2026

Klebsormidiophyceae sister genomes reveal multicellularity and stress adaptations.

Jianchao Ma, Rui Huo, Shenglong Bai, Jinling Huang

Abstract read
In one paragraph

Article in Journal of phycology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jianchao MaState Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, College of Agriculture, Henan University, Kaifeng, China.ORCID https://orcid.org/0000-0001-6768-3107
Rui HuoState Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, College of Agriculture, Henan University, Kaifeng, China.
Shenglong BaiState Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, College of Agriculture, Henan University, Kaifeng, China.
Jinling HuangState Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, College of Agriculture, Henan University, Kaifeng, China.

Funding

the National Natural Science Foundation of China 32000176
6 · The paper itself

Abstract

Klebsormidium and Interfilum are two closely related genera in the charophyte group Klebsormidiophyceae. Members of Klebsormidium are usually multicellular whereas those of Interfilum are unicellular. The genome of K. nitens has been sequenced using second-generation sequencing technology, but the assembled scaffolds are frequently fragmented. In this study, we re-sequenced the genomes of K. nitens using PacBio platform and obtained 15.8 Gb long reads. We also sequenced the genome of I. paradoxum and obtained 13 Gb long reads. The I. paradoxum genome assembly (81.7 Mb) included 59 contigs with N50 of 1.9 Mb, and the K. nitens assembly (132.9 Mb) included 188 contigs with N50 of 2.1 Mb. A total of 20,425 and 15,103 protein-coding genes were annotated in K. nitens and I. paradoxum, respectively. Comparative genome analyses identified 2805 gene families specific to Klebsormidiophyceae, which are enriched in gene ontology (GO) categories related to jasmonic acid (JA) biosynthesis and rRNA catabolism. Twenty-seven gene families, enriched in RNA-DNA hybrid ribonuclease activity and transmitter-gated ion channel activity, were found to have expanded in the last common ancestor of I. paradoxum and K. nitens. Several genes related to cell wall structure, including galactosyltransferase (GALT), were absent in I. paradoxum. We also found that approximately 50% of abiotic stress-related genes (e.g., late embryogenesis abundant, LEA genes) are present in land plants. The generation of K. nitens and I. paradoxum genomes and transcriptome data provides additional resources to understand the origin and evolution of land plants.

Indexed as

CharophyceaeGenome, PlantStress, PhysiologicalPhylogenyInterfilum paradoxumKlebsormidium nitensmulticellularityplant terrestrializationstress response

Identifiers

PMID42333967
PMCPMC13485171

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.