ArticleScientific reports2026
Towards million-token context windows: a topology-preserving framework for adaptive transformer sparsification.
Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.
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1 citing paper in PubMed.
- AI-Assisted Cross-Study Synthesis in Genome Editing: Comparing Long-Context Strategies and Uncovering Latent Contradictions in the CRISPR-Cas9 Guide RNA Prediction Literature.International journal of molecular sciences · 2026Article
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Abstract
Transformer self-attention and billion-node network analyses share a key limitation: all-to-all evaluation creates an [Formula: see text] computational cost. Existing methods address this by either distributing the workload across hardware or substituting recurrent operators. This trades associative recall for efficiency. We present Reduced Interaction Sampling (RIS), a stochastic sparsification framework. RIS computes only a fraction of possible pairwise interactions. By leveraging topological redundancy in real-world networks, RIS separates structural accuracy from computational expense. For example, on the com-LiveJournal graph with 4 million nodes, RIS preserves the degree centrality rank ([Formula: see text]) while using only 10% of the edges. A partition-based setup, RIS-Structural, identifies twice as many hubs as sliding-window methods under heavy sparsity (1.00% vs 0.50%, [Formula: see text]). In TinyLlama-1.1B attention tests (0.5k-65k tokens), RIS achieves a geometric reach of about 21k tokens at 65k-outperforming Longformer (≈2k) and BigBird (≈17k). Window-based models surpass [Formula: see text] Cumulative Attention Mass but lose 98% of hub recovery. This shows that dense scalar weights poorly reflect long-range geometric reach. RIS maintains a stable Hub Recall with up to 128 times longer sequences and an edge budget below 0.01%. Stochastic sampling provides a mathematically robust way to scale context architectures without structural collapse.
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