Evidence map›Paper›PMID 42331868›Full record

ArticleScientific reports2026

Pilot metaproteomic profiling reveals bacterial diversity and potential medical and veterinary relevance of tick microbiomes in northern Algeria.

Tahar Kernif, Clément Lozano, Fayez Ahmed Khardine, Bachir Medrouh, Aïssam Hachid, Bernard Fernandez, Naouel Eddaikra, Stéphane Delbecq, Jean Armengaud, Denis Sereno and 1 more

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Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Tahar KernifLaboratoire d'Eco-Epidémiologie Parasitaire et Génétique des Populations, Département Parasitologie, Institut Pasteur d'Algérie, Dely-Brahim, Algiers, 16048, Algeria. kernif.tahar@gmail.com.
Clément LozanoLaboratoire Innovations Technologiques pour la Détection et le Diagnostic (Li2D), Département Médicaments et Technologies pour la Santé (DMTS), Université Paris Saclay, CEA, INRAE, Bagnols-sur-Cèze, F-30207, France.
Fayez Ahmed KhardineLaboratoire des Arbovirus et Virus Emergents, Institut Pasteur d'Algérie, Algiers, 16096, Algeria.
Bachir MedrouhCentre de Recherche en Agropastoralisme, Djelfa, 17000, Algeria.
Aïssam HachidLaboratoire des Arbovirus et Virus Emergents, Institut Pasteur d'Algérie, Algiers, 16096, Algeria.
Bernard FernandezUMR ASTRE, CIRAD, INRAE, Université de Montpellier (I-MUSE), Montpellier, 34398, France.
Naouel EddaikraLaboratoire d'Eco-Epidémiologie Parasitaire et Génétique des Populations, Département Parasitologie, Institut Pasteur d'Algérie, Dely-Brahim, Algiers, 16048, Algeria.
Stéphane DelbecqFaculté de Pharmacie, Centre de Biologie Structurale-UMR 5048, Montpellier, 34098, France.
Jean ArmengaudLaboratoire Innovations Technologiques pour la Détection et le Diagnostic (Li2D), Département Médicaments et Technologies pour la Santé (DMTS), Université Paris Saclay, CEA, INRAE, Bagnols-sur-Cèze, F-30207, France.
Denis SerenoUMR INTERTRYP, IRD, CIRAD, Université de Montpellier (I-MUSE), Montpellier, 34032, France. denis.sereno@ird.fr.ORCID 0000-0002-0034-9291
Philippe HolzmullerUMR ASTRE, CIRAD, INRAE, Université de Montpellier (I-MUSE), Montpellier, 34398, France. philippe.holzmuller@cirad.fr.

Funding

Horizon 2020 Framework Programme LeiSHeild-RISE MATI Grant N°778298
6 · The paper itself

Abstract

Ticks are major ectoparasites and vectors of pathogens affecting humans, livestock, and wildlife. They harbor diverse microbial communities that may influence tick biology and interactions with microorganisms; however, functional information on tick-associated microbiomes remains limited, particularly in North Africa. In this pilot study, we applied a metaproteomic approach based on high-resolution tandem mass spectrometry to characterize bacterial communities associated with three tick species collected in Algeria: Rhipicephalus sanguineus sensu lato, Hyalomma aegyptium, and Hyalomma dromedarii. Peptide spectra were assigned to taxa using a two-step database search strategy based on NCBInr, and bacterial composition and relative abundance were compared across tick species and sampling locations. A total of 40 bacterial genera belonging to 32 families and four phyla were identified. Microbiome composition differed significantly between tick genera and collection locations, suggesting an influence of species-specific and geographical factors on microbial community structure. Dominant genera included Streptomyces, Bacillus, Clostridium, Escherichia, Flavobacterium, Paenibacillus, and Providencia. Peptides related to Coxiella spp. were frequently detected, consistent with previous reports of Coxiella-like endosymbionts in ticks. This pilot study provides a first metaproteomic characterization of tick-associated communities in Algeria. The results reveal species- and location-associated differences in microbial composition and highlight the potential of metaproteomics for exploring tick-associated microbiomes in North Africa.

Indexed as

BacteriaIxodidaeMicrobiotaProteomicsTicksAlgeriaAnimalsBiodiversityPilot ProjectsAlgeriaBacterial diversityHyalommaMetaproteomicsRhipicephalusTick microbiomeTicks

Identifiers

PMID42331868
PMCPMC13575237

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.