Evidence map›Paper›PMID 42326497›Full record

ArticleResearch square2026

High-Speed AFM Reveals Ligand-Dependent Supramolecular Switching of Human Phosphofructokinase-1.

Shuangyu Luo, Arnav Patil, Nicholas Primanis-Erickson, Xiaoding Jiang, Bradley A Webb, Ku-Lung Hsu, Yi-Chih Lin

Abstract readPreprint
In one paragraph

Article in Research square, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shuangyu LuoDepartment of Chemistry, The University of Texas at Austin, Austin, Texas 78712, USA.
Arnav PatilDepartment of Chemistry, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0009-0009-2015-6890
Nicholas Primanis-EricksonDepartment of Chemistry, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0009-0000-8386-9374
Xiaoding JiangDepartment of Chemistry, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0000-0002-4288-476X
Bradley A WebbDepartment of Biochemistry and Molecular Medicine, West Virginia University, Morgantown, West Virginia 26506, USA.ORCID 0000-0002-5299-2852
Ku-Lung HsuDepartment of Chemistry, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0000-0001-5620-3972
Yi-Chih LinDepartment of Chemistry, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0000-0002-6498-215X

Funding

Endocannabinoid Biosynthesis in Inflammation and PainR01DA043571 · NIDA · UNIVERSITY OF VIRGINIA · PI Ku-Lung Hsu · 2017 to 2026
$3.5M
Real-time structural and functional studies of SARS-CoV-2 spike proteinsR35GM150528 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI Yi-Chih Lin · 2023 to 2026
$1.6M
Defining and targeting substrate specificity of protein tyrosine phosphatasesR01GM144472 · NIGMS · UNIVERSITY OF VIRGINIA · PI HSU, KU-LUNG · 2022 to 2025
$1.6M
Chemical proteomic investigation of lipid kinase specificity and druggabilityR01AI169412 · NIAID · UNIVERSITY OF VIRGINIA · PI Ku-Lung Hsu · 2023 to 2026
$1.5M
Structure and function of glycolytic enzymes and their cellular regulationR35GM158392 · NIGMS · WEST VIRGINIA UNIVERSITY · PI Bradley A Webb · 2025 to 2026
$765k
NIAID NIH HHS R01 AI169412NIDA NIH HHS R01 DA043571NIGMS NIH HHS R01 GM144472NIGMS NIH HHS R35 GM150528NIGMS NIH HHS R35 GM158392
6 · The paper itself

Abstract

Phosphofructokinase-1 (PFK-1) catalyzes the ATP-dependent conversion of fructose-6-phosphate (F6P) to fructose-1,6-bisphosphate (F1,6BP), the first committed step of glycolysis. Beyond classical allostery, the liver isoform PFKL forms higher-order assemblies, but how ligand binding redirects intermolecular interactions remains unclear. Here we use high-speed atomic force microscopy (HS-AFM), topology-based AFM image simulations, and molecular dynamics (MD) simulations to define ligand-dependent assembly switching of human PFKL. Wild-type PFKL (PFKL WT) forms lattice-like assemblies under APO and ATP conditions, whereas coordinated ATP and F6P loading redirects assembly toward filaments in a ligand-order-dependent manner. APO-PFKL WT also forms lattice-like assemblies on or near membrane-supported surfaces, suggesting that interfacial environments influence where assembly initiates. The filament-defective N702T mutant forms ordered double-layer lattices and preserves this geometry under APO, ATP, and ATP+F6P conditions. MD simulations suggest that lattice stabilization arises from distributed inter-tetramer contacts. These findings define a structural framework for ligand-dependent supramolecular regulation of glycolysis.

Identifiers

PMID42326497
PMCPMC13278344

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.