Evidence map›Paper›PMID 42320474›Full record

ArticleCell host & microbe2026

CBASS limits bacteriophage production while maintaining cell viability in Pseudomonas aeruginosa.

Erin Huiting, Esther Shmidov, Bruce Wang, Sriharshita Musunuri, Zemer Gitai, Joseph Bondy-Denomy

Abstract read
In one paragraph

Article in Cell host & microbe, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Balancing of immune activation and suppression during phage infection.bioRxiv : the preprint server for biology · 2026
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Erin HuitingDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94158, USA.
Esther ShmidovDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94158, USA.
Bruce WangLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Sriharshita MusunuriDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94158, USA.
Zemer GitaiDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544, USA.
Joseph Bondy-DenomyDepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94158, USA; Quantitative Biosciences Institute, University of California, San Francisco, San Francisco, CA 94158, USA. Electronic address: joseph.bondy-denomy@ucsf.edu.

Funding

Medical Scientist Training Program (T32 NRSA Training Grant)T32GM141323 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Aimee Kao · 2021 to 2026
$10.5M
Quantitavie and Computational Biology Graduate ProgramT32HG003284 · NHGRI · PRINCETON UNIVERSITY · PI Joshua Michael Akey, Stanislav Y. Shvartsman · 2004 to 2026
$9.9M
Microbial Pathogenesis and Host DefenseT32AI060537 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joanne N. Engel · 2004 to 2026
$6.5M
A single-cell approach to developing non-traditional antibioticsDP1AI190418 · NIAID · PRINCETON UNIVERSITY · PI Zemer Gitai · 2024 to 2026
$5.7M
Formation and function of cell curvature in Vibrio choleraeR01GM143227 · NIGMS · PRINCETON UNIVERSITY · PI GITAI, ZEMER · 2022 to 2025
$1.3M
Identifying the mechanism of bacteriophage detection by cyclic-oligonucleotide signaling systemsR21AI168811 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BONDY-DENOMY, JOSEPH · 2022 to 2023
$444k
NHGRI NIH HHS T32 HG003284NIAID NIH HHS DP1 AI190418NIAID NIH HHS R21 AI168811NIAID NIH HHS T32 AI060537NIGMS NIH HHS R01 GM143227NIGMS NIH HHS T32 GM141323
6 · The paper itself

Abstract

Cyclic-oligonucleotide-based anti-phage signaling system (CBASS) is an immune pathway that recognizes phage infection and generates cyclic nucleotide signals, which activate effectors to limit phage replication. Membrane-acting effectors are proposed to induce cell death; however, this mechanism has not been assessed at endogenous effector expression levels. Here, we examine cell viability outcomes of the CBASS phospholipase effector (CapV) upon activation with 3',3'-cGAMP in Pseudomonas aeruginosa. Surprisingly, exogenous 3',3'-cGAMP or constitutive 3',3'-cGAMP signaling from the synthase (CdnA) enables robust cell growth and viability while abolishing phage production. Constitutive activation of the CapV effector induces no cell fitness cost and selectively blocks many phages. During CBASS activation, phage transcription and initial DNA replication proceed normally, but phages do not reach maximum DNA levels and exhibit impaired DNA packaging. We propose that CapV disrupts capsid assembly at the inner membrane, preventing stable phage DNA packaging, thereby allowing effective CBASS anti-viral activity while preserving host viability.

Indexed as

BacteriophagesPseudomonas aeruginosaPseudomonas PhagesBacterial ProteinsDNA ReplicationMicrobial ViabilitySignal TransductionVirus ReplicationBacterial Proteins3′,3′-cGAMPabortive infectionanti-phage immunityCapVCBASScell viabilityPseudomonas aeruginosa

Identifiers

PMID42320474
PMCPMC13450711

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.