Evidence map›Paper›PMID 42319935›Full record

ArticleScience advances2026

Pioneer-factor activity requires stable chromatin occupancy mediated by both sequence-specific binding and disordered protein domains.

Meghan M Freund, F Javier deHaro-Arbona, Sarah Baloul, Ali Torhorst, Charalambos Roussos, Abby J Ruffridge, Andrew Q Rashoff, Ryen Hazzard, Peter W Lewis, Sarah J Bray and 1 more

Abstract read
In one paragraph

Article in Science advances, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Meghan M FreundDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, WI, USA.ORCID 0000-0001-9608-5042
F Javier deHaro-ArbonaDepartment of Physiology, Development, and Neuroscience, University of Cambridge, Cambridge, UK.ORCID 0000-0002-2307-0859
Sarah BaloulDepartment of Physiology, Development, and Neuroscience, University of Cambridge, Cambridge, UK.ORCID 0000-0002-7204-8578
Ali TorhorstDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, WI, USA.
Charalambos RoussosDepartment of Physiology, Development, and Neuroscience, University of Cambridge, Cambridge, UK.ORCID 0009-0004-2520-0292
Abby J RuffridgeDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, WI, USA.
Andrew Q RashoffDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, WI, USA.
Ryen HazzardDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, WI, USA.
Peter W LewisDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, WI, USA.ORCID 0000-0002-9816-7823
Sarah J BrayDepartment of Physiology, Development, and Neuroscience, University of Cambridge, Cambridge, UK.ORCID 0000-0002-1642-599X
Melissa M HarrisonDepartment of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, WI, USA.ORCID 0000-0002-8228-6836

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pioneer transcription factors overcome the restrictive barrier imposed by chromatin to drive cell-fate specification, yet how their domains collectively support this activity remains unclear. Here, we use the deeply conserved pioneer factor Grainy head to define the protein-intrinsic features that govern pioneering activity. By integrating biochemistry, genomics, and quantitative live-cell imaging, we determined that both the conserved DNA-binding domain and the extended, intrinsically disordered N terminus are required for the stable chromatin occupancy that supports access to closed chromatin and the induction of chromatin accessibility. The disordered N terminus supports pioneer activity through interactions that do not rely on strict amino acid sequence but instead on overall composition. While our results show that pioneering activity depends on the combinatorial contributions of structured and disordered domains, mitotic retention depends solely on sequence-specific DNA binding. These results support stable chromatin occupancy mediated by multiple protein domains as necessary for pioneering function and that this is separable from the mechanisms required for mitotic retention.

Indexed as

ChromatinDNA-Binding ProteinsDrosophila ProteinsRepressor ProteinsTranscription FactorsAnimalsCell LineDrosophila melanogasterGenomicsHumansIntrinsically Disordered ProteinsNucleosomesProtein DomainsSingle Molecule ImagingChromatinDNA-Binding ProteinsDrosophila Proteinsgrh protein, DrosophilaIntrinsically Disordered ProteinsNucleosomesRepressor ProteinsTranscription Factors

Identifiers

PMID42319935
PMCPMC13281792

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.