Evidence map›Paper›PMID 42316271›Full record

ArticleBreast cancer research : BCR2026

Changes in active DNA demethylation pathway components during neoadjuvant chemotherapy and their prognostic significance in breast cancer.

Jolanta Guz, Olga Urbanowska-Domanska, Ewelina Zarakowska, Daniel Gackowski, Rafal Rozalski, Kinga Linowiecka, Aleksandra Skalska-Bugala, Piotr Rhone, Ryszard Olinski, Marek Foksinski

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Article in Breast cancer research : BCR, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Jolanta GuzDepartment of Clinical Biochemistry, Faculty of Pharmacy, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Karlowicza 24, 85‑092, Bydgoszcz, Poland.
Olga Urbanowska-DomanskaDepartment of Oncology, Professor Franciszek Lukaszczyk Oncology Centre, Romanowskiej 2, 85-796, Bydgoszcz, Poland.
Ewelina ZarakowskaDepartment of Clinical Biochemistry, Faculty of Pharmacy, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Karlowicza 24, 85‑092, Bydgoszcz, Poland.
Daniel GackowskiDepartment of Clinical Biochemistry, Faculty of Pharmacy, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Karlowicza 24, 85‑092, Bydgoszcz, Poland.
Rafal RozalskiDepartment of Clinical Biochemistry, Faculty of Pharmacy, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Karlowicza 24, 85‑092, Bydgoszcz, Poland.
Kinga LinowieckaDepartment of Human Biology, Institute of Biology, Faculty of Biological and Veterinary Sciences, Nicolaus Copernicus University in Toruń, Lwowska 1, 87-100, Toruń, Poland.
Aleksandra Skalska-BugalaDepartment of Immunology, Faculty of Pharmacy, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, M. Skłodowskiej Curie 9, 85-094, Bydgoszcz, Poland.
Piotr RhoneClinical Ward of Breast Cancer and Reconstructive Surgery, Professor Franciszek Lukaszczyk Oncology Centre, Romanowskiej 2, 85-796, Bydgoszcz, Poland.
Ryszard OlinskiDepartment of Clinical Biochemistry, Faculty of Pharmacy, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Karlowicza 24, 85‑092, Bydgoszcz, Poland.
Marek FoksinskiDepartment of Clinical Biochemistry, Faculty of Pharmacy, Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Karlowicza 24, 85‑092, Bydgoszcz, Poland. marekf@cm.umk.pl.ORCID http://orcid.org/0000-0002-1338-8230

Funding

Polish National Science Center 2015/17/B/NZ5/00640
6 · The paper itself

Abstract

backgroundNeoadjuvant chemotherapy (NACT) for early breast cancer is a systemic treatment administered before surgery to achieve regression of the primary lesion, perform breast-conserving surgery, if possible, and ensure long-term recurrence-free survival. The main aim of this study was to investigate the impact of NACT on the active DNA demethylation process and the relationship between the compounds involved in this path and disease-free survival (DFS) and overall survival (OS) during a six-year follow-up.

methodsThis study included 71 patients with breast cancer who were eligible for NACT consisting of 4 cycles of doxorubicin and cyclophosphamide regimens at doses of 60 mg/m

resultsDuring chemotherapy, increases in the levels of 5-methyl-2'-deoxycytidine (5-mdC), 5-formyl-2'-deoxycytidine (5-fdC), and 5-carboxyl-2'-deoxycytidine (5-cadC) and decreases in the expression of genes encoding TET (ten-eleven translocation) proteins, TDG (thymine DNA glycosylase), and AID (activation-induced cytidine deaminase) were observed in peripheral blood leukocytes. The Kaplan‒Meier curves revealed that patients with a lower level of 5-mdC in leukocyte DNA and urine before NACT, higher levels of 5-cadC, and lower TDG expression in tumor cells after treatment had a more favorable prognosis. Furthermore, significant correlations were found between the levels of 5-fdC in the DNA of leukocytes, 5-cadC in DNA tumor cells, the expression of TET2, and decreased Ki-67 after NACT.

conclusionsOur results indicate that NACT can alter active DNA demethylation markers. Breast cancer patients with prolonged DFS had lower leukocyte 5-mdC and higher urinary 5-mdC levels before chemotherapy. Thus, assessing 5-mdC in these minimally invasive biospecimens may provide prognostic information for breast cancer patients undergoing NACT.

Indexed as

Antineoplastic Combined Chemotherapy ProtocolsBreast NeoplasmsDNA DemethylationDNA Methylation5-MethylcytosineAdultAgedBiomarkers, TumorCyclophosphamideDioxygenasesDNA-Binding ProteinsDoxorubicinFemaleHumansMiddle AgedNeoadjuvant Therapy5-MethylcytosineBiomarkers, TumorCyclophosphamideDioxygenasesDNA-Binding ProteinsDoxorubicinPaclitaxelTET2 protein, humanActive DNA demethylationBreast cancerKi-67Neoadjuvant chemotherapy

Identifiers

PMID42316271
PMCPMC13523379

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.