Evidence map›Paper›PMID 42313054›Full record

ArticleApplied and environmental microbiology2026

Horizontal transfer of a 180-kbp genomic fraction among the largest viral genomes.

Hiroyuki Hikida, Ruixuan Zhang, Jingjie Chen, Yusuke Okazaki, Hiroyuki Ogata

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hiroyuki HikidaChemical Life Science, Institute for Chemical Research, Kyoto University, Uji, Kyoto, Japan.ORCID 0000-0002-4876-3133
Ruixuan ZhangChemical Life Science, Institute for Chemical Research, Kyoto University, Uji, Kyoto, Japan.ORCID 0000-0003-1441-2818
Jingjie ChenChemical Life Science, Institute for Chemical Research, Kyoto University, Uji, Kyoto, Japan.ORCID 0009-0006-4574-5761
Yusuke OkazakiChemical Life Science, Institute for Chemical Research, Kyoto University, Uji, Kyoto, Japan.ORCID 0000-0001-8770-2774
Hiroyuki OgataChemical Life Science, Institute for Chemical Research, Kyoto University, Uji, Kyoto, Japan.ORCID 0000-0001-6594-377X

Funding

Japan Society for the Promotion of Science 21J00174Japan Society for the Promotion of Science 22H00384Japan Society for the Promotion of Science 22K15175Japan Society for the Promotion of Science 25K18450
6 · The paper itself

Abstract

Viruses are generally considered tiny biological entities with small genomes; however, some dsDNA viruses, known as giant viruses, have large genomes that are comparable to those of small bacteria. These viruses may have evolved from a small ancestor. During their evolution, virus-to-virus horizontal gene transfer has substantially contributed to the expansion of the genomic repertoire of giant viruses. In this study, we identified a horizontal transfer of a large fraction of the genome between viruses in pandoraviruses, a group of giant viruses with the largest genome sizes reaching 2.5 Mbp. We isolated a pandoravirus that belongs to a known viral species. However, its genome size was 200 kbp larger than that of other strains in the same species. Comparative genomics identified a 180-kbp genomic fraction with 168 genes in the newly isolated virus, which may have been horizontally transferred from a distantly related pandoravirus. The gene composition in the 180-kbp region further indicates that this region was already large at the time of the horizontal transfer. Our findings suggest that pandoraviruses can horizontally exchange a large portion of their genomes. This event presumably represents one mechanism for accelerating genomic evolution and gigantism in giant viruses.IMPORTANCEGiant viruses are double-stranded DNA viruses belonging to the phylum

Indexed as

DNA VirusesGene Transfer, HorizontalGenome, ViralGiant VirusesDNA, ViralEvolution, MolecularGenome SizePhylogenyDNA, Viralgenomic evolutiongiant virushorizontal gene transfervirus isolation

Identifiers

PMID42313054
PMCPMC13390436

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.