ReviewNature protocols2026
Whole-organ spatial transcriptional analysis at cellular resolution using TRISCO.
Review in Nature protocols, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
0 citing papers in PubMed.
No citing paper in PubMed yet.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
11 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The emerging field of 3D histology centers on the molecular profiling of intact organs for a comprehensive understanding of biological systems. While current methods focus largely on protein visualization, techniques for whole-organ RNA transcript imaging remain underdeveloped. Here we present a detailed protocol for Tris buffer-mediated retention of in situ hybridization chain reaction signal in cleared organs (TRISCO), a method for single-cell RNA three-dimensional mapping across tissue volumes. By ensuring homogeneous and well-preserved labeling throughout the entire tissue, TRISCO has been successfully applied to several mouse organs, including the brain, lung, heart, kidney and spinal cord, as well as to rat and guinea pig brains. The protocol is straightforward, is adaptable to diverse laboratory setups and research questions and avoids complex instrumentation, specialized expertise or harsh chemical treatments that might limit its applicability. The workflow, which can be completed in 10-15 days, includes flexible stopping points for convenient scheduling and is suitable for users with expertise in light-sheet microscopy and animal handling.
Identifiers
42310443What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.