Evidence map›Paper›PMID 42304622›Full record

ArticlePediatric transplantation2026

Integrating Tissue Gene Expression Profiling With Histopathology in Pediatric Kidney Recipients.

Clarkson Crane, Erin Richardson, Courtney Benavides, Emily Zeiler, Elizabeth Ingulli

Abstract read
In one paragraph

Article in Pediatric transplantation, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Clarkson CraneDivision of Pediatric Nephrology, Department of Pediatrics, School of Medicine, University of California San Diego, San Diego, California, USA.ORCID https://orcid.org/0000-0002-2985-8559
Erin RichardsonRady Children's Hospital San Diego, San Diego, California, USA.
Courtney BenavidesRady Children's Hospital San Diego, San Diego, California, USA.
Emily ZeilerRady Children's Hospital San Diego, San Diego, California, USA.
Elizabeth IngulliDivision of Pediatric Nephrology, Department of Pediatrics, School of Medicine, University of California San Diego, San Diego, California, USA.ORCID https://orcid.org/0000-0003-2591-8945

Funding

CTSA UM1 Program at University of California San Diego Altman Clinical and Translational Research InstituteUM1TR005449 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Michael A Hogarth, David Mitchell Smith · 2025 to 2026
$20.6M
CTSA K12 Program at University of California San Diego Altman Clinical and Translational Research InstituteK12TR005441 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Colin A. Depp, ADRIANA H TREMOULET · 2025 to 2026
$3.2M
National Center for Advancing Translational Sciences, National Institutes of Health K12TR005441National Center for Advancing Translational Sciences, National Institutes of Health UM1TR005449NCATS NIH HHS K12 TR005441NCATS NIH HHS UM1 TR005449
6 · The paper itself

Abstract

backgroundBanff classification is the standard for diagnosing kidney allograft rejection, but histologic evaluation is limited by sampling error, interobserver variability, and interpretive subjectivity. The Molecular Microscope Diagnostic System (MMDx) evaluates tissue gene expression to classify rejection phenotypes and may clarify ambiguous histologic findings. Although utilized in adults, its clinical impact in pediatric kidney recipients is not well defined.

methodsWe performed a single-center retrospective study of pediatric kidney transplant recipients who underwent allograft biopsy between September 2023 and September 2025. Histologic diagnoses using 2022 Banff criteria were compared with MMDx molecular interpretations. Agreement between Banff scores and MMDx classifiers was assessed. Discrepancies were defined as discordance in rejection versus no rejection or rejection subtype classification, and changes in clinical management were described.

resultsForty-two biopsies from 38 recipients were analyzed. MMDx scores correlated with Banff indices (TCMR r = 0.55, ABMR r = 0.73, p < 0.001). Rejection vs. no rejection discordance occurred in 24% of biopsies (κ = 0.53) while subtype discordance occurred in 38% (κ = 0.38). In five of seven borderline TCMR cases, MMDx indicated no rejection, and graft function remained stable without treatment. Clinical management changed in 19% of biopsies following MMDx review, typically resulting in an increase in immunosuppression in settings of molecularly diagnosed rejection with equivocal histology.

conclusionsMMDx correlates with histologic assessment and can provide diagnostic clarification in ambiguous pediatric kidney allograft biopsies. Complementary use of histology and molecular diagnostics may inform clinical decision making; prospective studies are needed to determine effects on long-term outcomes.

Indexed as

Gene Expression ProfilingGraft RejectionKidney TransplantationAdolescentBiopsyChildChild, PreschoolFemaleHumansInfantKidneyMaleRetrospective Studies

Identifiers

PMID42304622
PMCPMC13272768

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.