Evidence map›Paper›PMID 42297820›Full record

ArticleNature communications2026

Efferocytosis of apoptotic bodies drives SARS-CoV-2 infection and macrophage inflammation.

Thanh Kha Phan, Dylan Sheerin, Bo Shi, Ngee K Chua, Sriram Gummadi, Merle Dayton, Liana Mackiewicz, Ana Maluenda, Dilara C Ozkocak, Georgia K Atkin-Smith and 15 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Thanh Kha PhanDepartment of Biochemistry and Chemistry, Research Centre for Extracellular Vesicles, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia. Kha.Phan@latrobe.edu.au.ORCID http://orcid.org/0000-0001-5802-1603
Dylan SheerinThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.
Bo ShiDepartment of Biochemistry and Chemistry, Research Centre for Extracellular Vesicles, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia.
Ngee K ChuaThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.
Sriram GummadiDepartment of Biochemistry and Chemistry, Research Centre for Extracellular Vesicles, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia.
Merle DaytonThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.
Liana MackiewiczThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-4340-4975
Ana MaluendaThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.
Dilara C OzkocakDepartment of Biochemistry and Chemistry, Research Centre for Extracellular Vesicles, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia.ORCID http://orcid.org/0000-0003-4614-5638
Georgia K Atkin-SmithThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.
Nashied PetonThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.
Ching-Seng AngThe Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia.
Omar AudiDepartment of Biochemistry and Chemistry, Research Centre for Extracellular Vesicles, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia.
Quan Thinh LeDepartment of Biochemistry and Chemistry, Research Centre for Extracellular Vesicles, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia.ORCID http://orcid.org/0000-0002-5588-9957
Thu Uyen TranDepartment of Biochemistry and Chemistry, Research Centre for Extracellular Vesicles, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia.ORCID http://orcid.org/0009-0009-6305-5870
Tuong-Khanh My TuDepartment of Biochemistry and Chemistry, Research Centre for Extracellular Vesicles, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia.
Rochelle TixeiraVIB-UGent Center for Inflammation Research, Department of Biomedical Molecular Biology, Ghent University, Ghent, Belgium.
George W AshdownThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.
Kathryn C DavidsonThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.
Pamali FonsekaDepartment of Biochemistry and Chemistry, Research Centre for Extracellular Vesicles, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia.
Rebecca FelthamThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0001-8376-6869
Marcel DoerflingerThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0001-9159-3021
Mark D HulettDepartment of Biochemistry and Chemistry, Research Centre for Extracellular Vesicles, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia.ORCID http://orcid.org/0000-0003-2072-5968
Anna K CoussensThe Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia. coussens.a@wehi.edu.au.ORCID http://orcid.org/0000-0002-7086-2621
Ivan K H PoonDepartment of Biochemistry and Chemistry, Research Centre for Extracellular Vesicles, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, Australia. i.poon@latrobe.edu.au.ORCID http://orcid.org/0000-0002-9119-7173

Funding

Department of Health | National Health and Medical Research Council (NHMRC) GNT1173662Department of Health | National Health and Medical Research Council (NHMRC) GNT2020750
6 · The paper itself

Abstract

SARS-CoV-2 typically utilises host receptor angiotensin-converting enzyme 2 (ACE2) for viral entry. Despite low ACE2 expression, monocyte-derived macrophages, the predominant lung macrophage during severe COVID-19, are often found with SARS-CoV-2 in infected lungs. As macrophage inflammation and cytokine storm are key immunopathological events that drive severe COVID-19, insights into mechanisms underlying viral entry into macrophages are critical to devise novel COVID-19 therapies. Mounting evidence supports that COVID-19 pathogenesis is associated with apoptosis, a type of programmed cell death which releases large extracellular vesicles called apoptotic bodies (ApoBDs). Here, we show that ApoBDs from SARS-CoV-2-infected cells carried infectious virions. Macrophages efferocytose these ApoBDs, enabling SARS-CoV-2 entry and pro-inflammatory responses including inflammasome and NF-κB signalling. To demonstrate targetability of this ApoBD efferocytosis-mediated viral entry, we screen for inhibitors of SARS-CoV-2-induced ApoBD formation and identified T-type voltage-gated calcium channel (T-channel) blockers. Mechanistically, T-channel blockers impair the extracellular calcium influxes required for ApoBD biogenesis. Importantly, blockade of ApoBD formation by T-channel blockers is able to limit cell-to-cell viral transmission, macrophage inflammation and lung immunopathology. Our discovery reveals a novel route for SARS-CoV-2 infection and cytokine storm induction, expanding our understanding of COVID-19 pathogenesis and demonstrating a therapeutic target for infectious diseases.

Indexed as

ApoptosisCOVID-19Extracellular VesiclesMacrophagesSARS-CoV-2Angiotensin-Converting Enzyme 2AnimalsEfferocytosisHumansInflammasomesInflammationMiceNF-kappa BSignal TransductionVirus InternalizationAngiotensin-Converting Enzyme 2InflammasomesNF-kappa B

Identifiers

PMID42297820
PMCPMC13408144

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.