ArticleArchives of virology2026
Characterization of a divergent isolate of rice stripe virus from volunteer durum wheat in France.
Article in Archives of virology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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5 authors.
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Abstract
A highly divergent isolate of rice stripe virus (RSV, Tenuivirus oryzaclavatae) was identified by high-throughput sequencing (HTS) of volunteer durum wheat (Triticum turgidum subsp. durum (Desf.) Husn.) plants collected in summer 2023 in Loir-et-Cher (France). The complete sequence of all four genomic RNAs was obtained from a single plant, showing a genomic organization similar to that of known RSV isolates but with significant indel polymorphism in non-coding regions. Genomic RNAs showed between 81.6% (RNA4) and 88.3% (RNA3) nucleotide identity with RSV reference isolates, while encoded proteins showed between 86.3% (NSvc2) and 97.4% (L and NSvc4 (movement protein)) with those of the reference RSV isolate. The 97.4% identity in the L protein should be compared with the average pairwise identity of 99.0% +/- 0.1% among all RSV isolates present in GenBank, as well as with the ICTV species demarcation threshold of 5% divergence. This demonstrates that the French wheat variant is indeed an RSV isolate but a highly divergent one, which questions our current understanding of RSV geographic distribution, diversity and evolution history.
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