Evidence map›Paper›PMID 42294667›Full record

ArticleMicrobiology resource announcements2026

BRCore: an R package implementing flexible selection of core taxa using contribution to Bray-Curtis dissimilarity and neutral model fitting.

Bolívar Aponte Rolón, Brandon Kristy, Ashley Shade, Nejc Stopnisek, Sarah L Lebeis, Adina Howe, Gian Maria Niccolò Benucci

Abstract read
In one paragraph

Article in Microbiology resource announcements, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bolívar Aponte RolónDepartment of Agricultural and Biosystems Engineering, Iowa State University, Ames, Iowa, USA.ORCID 0000-0002-2544-4551
Brandon KristyDepartment of Integrative Biology, Michigan State University, East Lansing, Michigan, USA.ORCID 0000-0003-2421-7143
Ashley ShadeCNRS, INRAE, LEM, UMR 5557, UMR 1418, Université Lyon 1, Villeurbanne, France.ORCID 0000-0002-7189-3067
Nejc StopnisekDepartment for Microbiological Research, National Laboratory of Health, Environment and Food, Maribor, Slovenia.ORCID 0000-0002-1532-6826
Sarah L LebeisGreat Lakes Bioenergy Research Center (GLBRC), East Lansing, Michigan, USA.ORCID 0000-0001-9417-9678
Adina HoweDepartment of Agricultural and Biosystems Engineering, Iowa State University, Ames, Iowa, USA.ORCID 0000-0002-7705-343X
Gian Maria Niccolò BenucciGreat Lakes Bioenergy Research Center (GLBRC), East Lansing, Michigan, USA.ORCID 0000-0003-1589-947X

Funding

U.S. Department of Energy DE-SC0018409, DE-FC02-07ER64494U.S. Department of Energy SC0018420
6 · The paper itself

Abstract

Identifying core taxa in microbial ecology highlights groups likely to participate in a broad range of potential ecological interactions. Here, we present BRCore, an R package to identify core taxa using abundance-occupancy distributions and beta-diversity contributions across ecological niches, and predict stochastic and deterministic taxa.

Indexed as

ASV/OTU abundance-occupancy distributionsBray-Curtis dissimilaritycommunity ecologymicrobiome statisticspersistent taxaSloan neutral model

Identifiers

PMID42294667
PMCPMC13348219

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.