Evidence map›Paper›PMID 42290098›Full record

ArticleThe Plant journal : for cell and molecular biology2026

Chloroplast- and mitochondrion-specific random C-to-T mutagenesis for forward genetics of organelle genomes.

Nanami Kosaka, Yoshiki Harada, Issei Nakazato, Miki Okuno, Takehiko Itoh, Nobuhiro Tsutsumi, Shin-Ichi Arimura

Abstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Nanami KosakaGraduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Yoshiki HaradaGraduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Issei NakazatoGraduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Miki OkunoSchool of Medicine, Kurume University, Fukuoka, Japan.
Takehiko ItohSchool of Life Science and Technology, Institute of Science Tokyo, Tokyo, Japan.
Nobuhiro TsutsumiGraduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
Shin-Ichi ArimuraGraduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-9537-1626

Funding

Japan Society for the Promotion of Science 22H09425Japan Society for the Promotion of Science 24H02271Japan Society for the Promotion of Science 25KJ0774
6 · The paper itself

Abstract

Organelle genomes in plastids (including chloroplasts) and mitochondria encode essential genes for photosynthesis, respiration, and agronomic traits, representing promising targets for crop improvement. However, their high copy number and non-Mendelian inheritance have long hindered efficient modification compared to nuclear genomes. Recent advances in organelle base editing (C-to-T and A-to-G) have enabled precise nucleotide substitutions, yet information on useful mutations remains limited. Here, to establish a forward genetics platform for C-to-T substitutions, we developed a method to introduce random C-to-T mutations throughout the entire organelle genomes of Arabidopsis thaliana. We engineered a fusion protein, WHY2-CD mutator, combining cytidine deaminase (CD), uracil glycosylase inhibitor, and sequence-nonspecific DNA-binding protein WHIRLY2 (WHY2), fused to organelle-targeting peptides. This system introduced dispersed C-to-T substitutions specifically within plastid or mitochondrial genomes. In T

Indexed as

ArabidopsisChloroplastsGenome, MitochondrialMitochondriaArabidopsis ProteinsGenome, PlantGenome, PlastidMutagenesisPlants, Genetically ModifiedArabidopsis ProteinsArabidopsis thalianaforward geneticsorganelle genomespoint mutationrandom mutagenesis

Identifiers

PMID42290098
PMCPMC13266288

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.