Evidence map›Paper›PMID 42284329›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2026

Phosphoproteome-derived peptide libraries for deep specificity profiling of phosphatases and phospholyases.

Katarzyna Radziwon, Laura A Campbell, Lauren E Mazurkiewicz, Sopo Jalalishvili, Izabelle Eppinger, Aanika Parikh, Amy M Weeks

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Phosphoproteome-derived peptide libraries for deep specificity profiling of phosphatases and phospholyases.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Katarzyna Radziwon *Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706.
Laura A Campbell *Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706.
Lauren E MazurkiewiczDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706.
Sopo JalalishviliDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706.ORCID 0009-0005-6017-8921
Izabelle EppingerDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706.
Aanika ParikhDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706.
Amy M WeeksDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706.ORCID 0000-0003-4700-8256

Funding

Post-translational modification proteomics in 4D: Chemoenzymatic tools to map the dynamic spatial organization of eukaryotic signaling pathwaysDP2GM149548 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI WEEKS, AMY M · 2022 to 2025
$2.3M
HHS | NIH (NIH) 5 T32 GM135066HHS | NIH (NIH) DP2GM149548NIGMS NIH HHS DP2 GM149548
6 · The paper itself

Abstract

Protein phosphorylation is dynamically regulated by the opposing activities of phosphowriter enzymes (kinases) and phosphoeraser enzymes (phosphatases and phospholyases). While significant progress has been made toward defining the sequence preferences of kinases, the selectivity of phosphoerasers has not been explored at scale. Here, we develop an experimental platform based on tandem mass spectrometry analysis of phosphoproteome-derived peptide libraries (PhosPropels) to map phosphoeraser activity across thousands of biologically relevant phosphosites. We extract positional residue preferences to rapidly define sequence motifs recognized by eight phosphoerasers spanning diverse species of origin, protein folds, and enzymatic mechanisms, yielding biological insights into pathways targeted by these enzymes. Taking advantage of the throughput of our approach, we profiled 20 variants of the phosphothreonine lyase OspF from

Indexed as

Peptide LibraryPhosphoproteinsPhosphoric Monoester HydrolasesProteomeAmino Acid SequencePhosphorylationProteomicsSubstrate SpecificityTandem Mass SpectrometryPeptide LibraryPhosphoproteinsPhosphoric Monoester HydrolasesProteomechemical biologyphosphatasesphospholyasesphosphoproteomicsphosphorylation

Identifiers

PMID42284329
PMCPMC13273362

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.