Evidence map›Paper›PMID 42277830›Full record

ArticleRespiratory research2026

Identifying molecular signatures of parapneumonic effusion reveals HMGB2 as the disease progression biomarker.

Kuo-An Wu, Min Chen, Kun-Lin Wu, Chih-Ho Lai, Ian Yi-Feng Chang, Fei-Wen Jan, Chia-Yin Chin, Pei-Chu Tasi, Chih-Ching Wu, Yu-Hsuan Kuo and 4 more

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Article in Respiratory research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

14 authors.

Kuo-An WuDepartment of Internal Medicine, Taoyuan Armed Forces General Hospital, Taoyuan, Taiwan.
Min ChenGraduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan, Taiwan.
Kun-Lin WuDepartment of Internal Medicine, Taoyuan Armed Forces General Hospital, Taoyuan, Taiwan.
Chih-Ho LaiGraduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan, Taiwan.
Ian Yi-Feng ChangMolecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan.
Fei-Wen JanDepartment of Microbiology and Immunology, College of Medicine, Chang Gung University, Taoyuan, Taiwan.
Chia-Yin ChinMolecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan.
Pei-Chu TasiGraduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan, Taiwan.
Chih-Ching WuMolecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan.
Yu-Hsuan KuoGraduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan, Taiwan.
Li-Jane ShihDepartment of Medical Laboratory, Taoyuan Armed Forces General Hospital, Taoyuan, Taiwan.
Wan-Ling WangDepartment of Microbiology and Immunology, College of Medicine, Chang Gung University, Taoyuan, Taiwan.
Yung-Hsi KaoDepartment of Life Sciences, National Central University, Taoyuan, Taiwan. ykao@cc.ncu.edu.tw.
Chia-Yu YangGraduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan, Taiwan. chiayu-yang@mail.cgu.edu.tw.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundParapneumonic effusion (PPE) exacerbation is associated with high morbidity and mortality in pneumonia patients. However, the molecular signatures underlying the progression and severity of PPE remain poorly understood. We therefore employed whole-transcriptome profiling to comprehensively characterize the molecular landscape associated with PPE exacerbation and its clinical manifestations.

methodsIn the discovery cohort, 26 PPE patients underwent capture-based targeted RNA sequencing and were stratified by disease severity into non-severe PPE (UPPE, n = 9) and severe PPE (n = 17), comprising CPPE (n = 12) and empyema (n = 5). Bioinformatic functional annotation was performed to delineate gene expression signatures associated with disease progression from non-severe to severe PPE. Integrated analyses of the transcriptome and secretome of pleural effusions identified high-mobility group box 2 (HMGB2) as a novel biomarker for severe PPE. In the validation cohort, 220 patients with different pleural effusion etiologies were enrolled for enzyme-linked immunosorbent assay (ELISA) analysis to evaluate HMGB2 levels. The functional relevance of HMGB2 in PPE progression was characterized in neutrophils and macrophages.

resultsIn pneumonia patients, severe PPE was associated with higher expression of 232 genes and lower expression of 212 genes compared with non-severe PPE. Upregulated gene signatures associated with disease progression in severe PPE were enriched in neutrophil degranulation, glycolysis/gluconeogenesis, HIF-1 signaling, and inflammatory response pathways. Elevated HMGB2 levels in severe PPE enabled accurate discrimination from other pleural effusion cases, with an AUC of 0.93. In vitro infection with Streptococcus pneumoniae significantly increased HMGB2, IL1β, and IL8 expression in neutrophils and macrophages. Moreover, HMGB2 overexpression enhanced NF-κB activation as well as IL-1β and IL-8 levels in PGN-stimulated macrophages. These results suggest that HMGB2 regulates IL-1β and IL-8 via the NF-κB signaling pathway.

conclusionsOur study delineates molecular signatures driving PPE exacerbation and highlights HMGB2 as a novel biomarker and therapeutic target with potential to prevent severe PPE.

Indexed as

Disease ProgressionHMGB2 ProteinPleural EffusionPneumoniaAgedBiomarkersCohort StudiesFemaleGene Expression ProfilingHumansMaleMiddle AgedBiomarkersHMGB2 ProteinHigh mobility group protein B2Parapneumonic effusionPneumoniaSecretomeTranscriptome

Identifiers

PMID42277830
PMCPMC13504795

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.