Evidence map›Paper›PMID 42277454›Full record

ArticleArchives of virology2026

A new putative carlavirus identified by metagenomic analysis in a wild weed in Angola.

Serafina Serena Amoia, Annalisa Giampetruzzi, Luisa Flora Antònio, Aderito Tomàs Pais da Cunha, Angelantonio Minafra

Abstract read
In one paragraph

Article in Archives of virology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Serafina Serena AmoiaInstitute for Sustainable Plant Protection - CNR, Bari, Italy.ORCID http://orcid.org/0000-0002-1661-8417
Annalisa GiampetruzziInstitute for Sustainable Plant Protection - CNR, Bari, Italy.ORCID http://orcid.org/0000-0002-0946-0105
Luisa Flora AntònioInstituto Superior Politécnico do Cuanza Sul, Sumbe, Angola.
Aderito Tomàs Pais da CunhaCentro Nacional de Investigação Cientifica, Luanda, Angola.ORCID http://orcid.org/0000-0001-8855-7978
Angelantonio MinafraInstitute for Sustainable Plant Protection - CNR, Bari, Italy. angelantonio.minafra@cnr.it.ORCID http://orcid.org/0000-0002-0547-7129

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A metagenomic analysis was performed by high-throughput sequencing (HTS) to identify viruses infecting a wild weed collected in Seles (Angola), which exhibited clear yellowing symptoms. The analysis led to the discovery of a putatively novel carlavirus, tentatively named 'Seles weed carlavirus'. The complete genome sequence, consisting of 8,597 nucleotides, poly-A tail excluded, exhibited the typical organization of members of the genus Carlavirus, including the replicase polyprotein (ORF1); the triple gene block (ORFs 2-4); the coat protein (ORF5) and an RNA-binding protein (ORF6). The replicase polyprotein and coat protein gene regions of the newly described virus shared the highest amino acid sequence identity with the corresponding sequences of cowpea mild mottle virus (51.40%) and Hainan betaflexivirus (63.08%), respectively. The infection was further confirmed by RT-PCR with multiple specific targeted primer pairs, whose related amplicons were cloned and sequenced.

Indexed as

CarlavirusPlant DiseasesPlant WeedsAngolaGenome, ViralHigh-Throughput Nucleotide SequencingMetagenomicsOpen Reading FramesPhylogenyRNA, ViralRNA, Viral

Identifiers

PMID42277454
PMCPMC13260034

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.