Evidence map›Paper›PMID 42275133›Full record

ArticleGlycobiology2026

Mapping ST3GAL transferase specificities in the glycosylation landscape of N/TERT-1 keratinocytes using Glycogenomics and mass spectrometry.

Agnes L Hipgrave Ederveen, Ming Song, Tao Zhang, Jordy van Angeren, Ieva Bagdonaite, Sally Dabelsteen, Hans H Wandall, Noortje de Haan

Abstract read
In one paragraph

Article in Glycobiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Agnes L Hipgrave EderveenCenter for Proteomics and Metabolomics, Leiden University Medical Center, Albinusdreef 2, 2333 ZA Leiden, The Netherlands.ORCID 0000-0003-1689-0442
Ming SongCopenhagen Center for Glycocalyx Research, University of Copenhagen, Blegdamsvej 3, 2200 Copenhagen, Denmark.
Tao ZhangCenter for Proteomics and Metabolomics, Leiden University Medical Center, Albinusdreef 2, 2333 ZA Leiden, The Netherlands.ORCID 0000-0003-0427-9953
Jordy van AngerenCenter for Proteomics and Metabolomics, Leiden University Medical Center, Albinusdreef 2, 2333 ZA Leiden, The Netherlands.
Ieva BagdonaiteCopenhagen Center for Glycocalyx Research, University of Copenhagen, Blegdamsvej 3, 2200 Copenhagen, Denmark.ORCID 0000-0002-9383-8448
Sally DabelsteenCopenhagen Center for Glycocalyx Research, University of Copenhagen, Blegdamsvej 3, 2200 Copenhagen, Denmark.ORCID 0000-0002-4279-8060
Hans H WandallCopenhagen Center for Glycocalyx Research, University of Copenhagen, Blegdamsvej 3, 2200 Copenhagen, Denmark.ORCID 0000-0003-0240-9232
Noortje de HaanCenter for Proteomics and Metabolomics, Leiden University Medical Center, Albinusdreef 2, 2333 ZA Leiden, The Netherlands.ORCID 0000-0001-7026-6750

Funding

Danish National Research Foundation DNRF196European Union's Horizon Europe research and innovation programme H2020-ERCHealthHolland TKI-LSH-DT2O22LUMC:2022-02Horizon-CSA 101079417Horizon-EIC-2023-Pathfinder 101161353Horizon-EIC-2023-Pathfinder 101161509Horizon-TMA-MSCA-DN 101072427Horizon-TMA-MSCA-DN 101119911Independent Research Fund Denmark 2066-00043BNEYE Foundation, Lundbeck Foundation R223-2016-563The Friis Foundation
6 · The paper itself

Abstract

Glycan sialylation is vital for proper cellular function and signaling. The six-membered ST3GAL family of sialyltransferases catalyzes the transfer of sialic acid in an α2,3-linkage to galactose residues on the outermost glycan epitopes. Dysregulation of sialyltransferase activity has been linked to diverse pathological processes. To expand our understanding of the substrate specificity and cooperative function of the ST3GAL family enzymes in protein and lipid glycosylation, we systematically analyzed the function of individual ST3GAL enzymes in glycan biosynthesis using a panel of CRISPR/Cas9-engineered human keratinocyte (N/TERT-1) cell lines with single or combined ST3GAL gene knockouts (KO). For protein glycosylation, KO of ST3GAL1 reduced sialylation of type 3 epitopes (Galβ1,3-GalNAc-) on both core 1 and 2 O-glycans, while complete ablation of sialylation was observed for the combined ST3GAL1 and ST3GAL2 KO. ST3GAL2 KO alone had limited effect, but reduced sialylation of specifically core 1 O-glycans. KO of ST3GAL4 and the combined KO of ST3GAL4 and ST3GAL6 reduced sialylation of type 1 and 2 epitopes (Galβ1,3/4-GlcNAc-) on both N- and O-glycans, while no effect was observed for the single KO of ST3GAL6. In GSL glycan biosynthesis, ST3GAL5 regulated lactosylceramide sialylation, as anticipated. ST3GAL2 and ST3GAL6 mediate sialylation of type 3 motifs, whereas ST3GAL3 and ST3GAL6 target type 2 epitopes, with ST3GAL3 exhibiting no discernible preference between type 1 and type 2 substrates. Our findings reveal that glycosyltransferase specificities are shaped by substrate availability, epitope distribution across glycan classes, and enzyme competition, which can only be captured by investigating this within the cellular context.

Indexed as

KeratinocytesPolysaccharidesSialyltransferasesbeta-Galactoside alpha-2,3-SialyltransferaseCell LineGlycomicsGlycosylationHumansMass SpectrometrySubstrate Specificitybeta-Galactoside alpha-2,3-SialyltransferasePolysaccharidesSialyltransferasesST3GAL1 protein, humangenome engineeringglycomicssialyltransferasesα2,3-N-acetylneuraminic acid

Identifiers

PMID42275133
PMCPMC13284783

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.