Evidence map›Paper›PMID 42273914›Full record

ArticleNucleic acids research2026

The RecBCD complex interacts directly with the DNA sliding clamp in Escherichia coli.

Ida Mathilde Marstein Riisnæs, Synnøve Brandt Ræder, Signe Simonsen, Krister Vikedal, Paul Hoff Backe, Line Johnsen, Magnar Bjørås, James Alexander Booth, Birthe B Kragelund, Kirsten Skarstad and 1 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Ida Mathilde Marstein RiisnæsDepartment of Microbiology, Oslo University Hospital HF, Rikshospitalet, 0372 Oslo, Norway.
Synnøve Brandt RæderDepartment of Microbiology, Oslo University Hospital HF, Rikshospitalet, 0372 Oslo, Norway.ORCID 0000-0002-1562-6343
Signe SimonsenStructural Biology and NMR Laboratory, Department of Biology, University of Copenhagen, 2200 Copenhagen, Denmark.ORCID 0000-0003-0376-7488
Krister VikedalDepartment of Microbiology, Oslo University Hospital HF, Rikshospitalet, 0372 Oslo, Norway.ORCID 0000-0002-7475-4636
Paul Hoff BackeDepartment of Microbiology, Oslo University Hospital HF, Rikshospitalet, 0372 Oslo, Norway.
Line JohnsenDepartment of Microbiology, Oslo University Hospital HF, Rikshospitalet, 0372 Oslo, Norway.
Magnar BjøråsDepartment of Microbiology, Oslo University Hospital HF, Rikshospitalet, 0372 Oslo, Norway.ORCID 0000-0001-8759-1170
James Alexander BoothDepartment of Microbiology, Oslo University Hospital HF, Rikshospitalet, 0372 Oslo, Norway.ORCID 0000-0001-9452-3424
Birthe B KragelundStructural Biology and NMR Laboratory, Department of Biology, University of Copenhagen, 2200 Copenhagen, Denmark.ORCID 0000-0002-7454-1761
Kirsten SkarstadDepartment of Microbiology, Oslo University Hospital HF, Rikshospitalet, 0372 Oslo, Norway.ORCID 0000-0002-8563-2730
Emily HelgesenDepartment of Microbiology, Oslo University Hospital HF, Rikshospitalet, 0372 Oslo, Norway.ORCID 0000-0002-3992-7394

Funding

Helse Sør-Øst RHF 2019022Helse Sør-Øst RHF 2020043Novo Nordisk Foundation #NNF18OC0032996Novo Nordisk Foundation #NNF18OC0033926
6 · The paper itself

Abstract

DNA sliding clamps are central coordinators of genome replication and maintenance, yet the full binding network ("interactome") of the bacterial β-clamp remains incompletely defined. Here, we report a novel interaction between Escherichia coli β-clamp and the helicase-nuclease RecBCD complex. Using bacterial two-hybrid assays and co-immunoprecipitation, supported by fluorescence microscopy, we show that RecB associates with β-clamp. Nuclear magnetic resonance spectroscopy maps the interaction to the canonical ligand pocket of β-clamp and identifies a clamp-binding motif in RecB (residues 1018-1023, QVEMEF), whose mutation abolishes binding. Functional assays indicate that this interaction occurs upon conformational switching of RecBCD at a Chi site, and disruption of the motif reduces survival after DNA damage. We also find indications of a second binding site in the helicase domain of RecB. These findings expand the β-clamp interactome and suggest a previously unappreciated role for β-clamp in DNA double-strand break repair, with potential implications for antibacterial strategies.

Indexed as

DNA Polymerase IIIEscherichia coliEscherichia coli ProteinsExodeoxyribonuclease VBinding SitesDNA, BacterialDNA DamageProtein Bindingbeta subunit, DNA polymerase IIIDNA, BacterialDNA Polymerase IIIEscherichia coli ProteinsExodeoxyribonuclease Vexodeoxyribonuclease V, E coli

Identifiers

PMID42273914
PMCPMC13254535

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.