Evidence map›Paper›PMID 42272957›Full record

ArticleBioengineering & translational medicine2026

BrAIn: A comprehensive artificial intelligence-based morphology analysis system for brain organoids and neuroscience.

Burak Kahveci, Elifsu Polatli, Ali Eren Evranos, Hüseyin Güner, Gökhan Karakülah, Yalin Bastanlar, Sinan Güven

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Article in Bioengineering & translational medicine, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Burak Kahveciİzmir Biomedicine and Genome Center İzmir Türkiye.ORCID https://orcid.org/0000-0001-7041-0986
Elifsu Polatliİzmir Biomedicine and Genome Center İzmir Türkiye.
Ali Eren Evranosİzmir Biomedicine and Genome Center İzmir Türkiye.
Hüseyin Günerİzmir Biomedicine and Genome Center İzmir Türkiye.
Gökhan Karakülahİzmir Biomedicine and Genome Center İzmir Türkiye.
Yalin BastanlarDepartment of Computer Engineering, Faculty of Engineering İzmir Institute of Technology İzmir Türkiye.
Sinan Güvenİzmir Biomedicine and Genome Center İzmir Türkiye.ORCID https://orcid.org/0000-0001-5212-5516

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human-induced pluripotent stem cells (iPSCs) offer transformative potential for biomedical research, with iPSC-derived organoids providing more physiologically relevant models than traditional 2D cell cultures. Among these, brain organoids (BO) are particularly valuable for drug screening, disease modeling, and investigations into molecular pathways. Accurate representation of brain morphology is critical, as more complex organoid structures better mimic the human brain. Deep learning (DL) and machine learning (ML) approaches have become integral to analyzing organoid morphology, yet tools for comprehensive, time-resolved assessments are scarce. Here, we introduce

Indexed as

artificial intelligencebrain organoidcomputer visiondeep learningmicrofluidics

Identifiers

PMID42272957
PMCPMC13247413

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.