Evidence map›Paper›PMID 42266559›Full record

ArticleJournal of computational and applied mathematics2026

A Physics-Informed neural network (PINN) for parameter identification in analytical ultracentrifugation (AUC) analysis.

Weiming Cao, Reece Martin, Borries Demeler

Abstract read
In one paragraph

Article in Journal of computational and applied mathematics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

3 authors.

Weiming CaoDepartment of Mathematics, University of Texas at San Antonio, San Antonio, 78249, TX, USA.ORCID 0009-0006-4981-7646
Reece MartinDepartment of Chemistry and Biochemistry, University of Lethbridge, T1K 3M4, Lethbridge, AB, Canada.ORCID 0009-0007-0244-8633
Borries DemelerDepartment of Chemistry and Biochemistry, University of Lethbridge, T1K 3M4, Lethbridge, AB, Canada.ORCID 0000-0002-2414-9518

Funding

Development of an UltraScan Meta-Scheduler for HPC Job SubmissionR01GM120600 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Emre H. Brookes, BORRIES DEMELER · 2016 to 2026
$3.6M
NIGMS NIH HHS R01 GM120600
6 · The paper itself

Abstract

In this paper, we develop a Physics-Informed Neural Network (PINN) for parameter estimation in Analytical Ultracentrifugation (AUC) analysis. We use a feed-forward dense network composed of multi-layer perceptrons to approximate the solution of the Lamm equation, which models the physics of the ultracentrifugation process. The sedimentation and diffusion coefficients are trainable parameters in the network. The loss function for the network combines several metrics, including the initial and boundary conditions, the residuals of the differential equation, and the difference between the neural network solution and the experimental data. To test the performance of this method, we first use simulated data from finite element solutions of the Lamm equation with known parameter values to train the network. Our results demonstrate that, even with relatively small observation datasets, our PINN generates excellent agreement with solutions of the Lamm equation, producing accurate parameter estimates for the sedimentation and diffusion coefficients, as well as the loading concentration. We further applied our PINN to actual experimental data collected on an Optima AUC instrument. Our PINN was modified to identify and remove the time and radially invariant noise components contained in the experimental data. We also successfully tested this technique on systems with solutes exhibiting concentration-dependent non-ideality, as well as on cases with unknown non-uniform initial concentrations. The results in this paper provide proof of concept for the application of neural networks to AUC analysis.

Indexed as

Analytical ultracentrifugationArtificial neural networkParameter identificationPhysics-informed neural network

Identifiers

PMID42266559
PMCPMC13246141

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.