Evidence map›Paper›PMID 42262632›Full record

ArticleJournal of medical systems2026

Vitabel: A Python Framework for Visualizing and Labelling High-Resolution Physiological Data for Critical Care Machine Learning.

Simon Orlob, Wolfgang J Kern, Benjamin Hackl, Jan Wnent, Jan-Thorsten Gräsner, Martin Holler

Abstract read
In one paragraph

Article in Journal of medical systems, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Simon OrlobInstitute for Emergency Medicine, University Hospital Schleswig-Holstein, Arnold-Heller-Straße 3, 24105, Kiel, Germany. simon.orlob@i-med.ac.at.ORCID http://orcid.org/0000-0001-7799-4822
Wolfgang J KernDepartment of Mathematics and Scientific Computing, University of Graz, Heinrichstrasse 36, Graz, 8010, Austria. wolfgangjohannkern@gmail.com.ORCID http://orcid.org/0000-0001-5080-382X
Benjamin HacklDepartment of Mathematics and Scientific Computing, University of Graz, Heinrichstrasse 36, Graz, 8010, Austria. benjamin.hackl@uni-graz.at.ORCID http://orcid.org/0000-0003-2998-9599
Jan WnentInstitute for Emergency Medicine, University Hospital Schleswig-Holstein, Arnold-Heller-Straße 3, 24105, Kiel, Germany.ORCID http://orcid.org/0000-0002-8685-858X
Jan-Thorsten GräsnerInstitute for Emergency Medicine, University Hospital Schleswig-Holstein, Arnold-Heller-Straße 3, 24105, Kiel, Germany.ORCID http://orcid.org/0000-0001-8143-0376
Martin HollerDepartment of Mathematics and Scientific Computing, University of Graz, Heinrichstrasse 36, Graz, 8010, Austria. martin.holler@uni-graz.at.ORCID http://orcid.org/0000-0002-2895-2375

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Artificial intelligence offers great opportunities in critical care, particularly when a vast amount of continuously acquired physiological data is incorporated. High-quality, reliably labelled data are paramount for developing and training artificial intelligence methods. However, routinely recorded data in critical care are often noisy, and the sheer volume of high-resolution data is challenging to manage. Generalizable solutions for these problems are lacking, restricting progress. To address these barriers, we developed Vitabel, an open-source Python framework for post hoc loading, visualizing, aligning, and annotating medical time series. The framework provides sensible defaults and interactive components for efficient use in preconfigured workflows, while remaining flexible and extendable for custom analysis and annotation pipelines. It integrates seamlessly into Jupyter Notebooks, providing an interactive, customizable interface for visual interaction with the data. In this publication, we demonstrate its utility across three use cases. The code and exemplary data are provided as browser-based demos. Vitabel is freely available and published under the MIT license accompanying this publication.

Indexed as

Critical CareMachine LearningSoftwareHumansUser-Computer InterfaceCritical careLabellingPythonResuscitationSoftwareTime series data

Identifiers

PMID42262632
PMCPMC13249750

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.