Evidence map›Paper›PMID 42260364›Full record

ArticleClinical proteomics2026

A multi-omics study reveals pathway-level insights and predictive biomarkers in pediatric TB.

Zaynab Mousavian, Mark R Segal, Roger I Calderon, Juaneta Luiz, Esin Nkereuwem, Peter Wambi, Mandar Paradkar, Molly F Franke, Gunilla Källenius, Beate Kampmann and 10 more

Abstract read
In one paragraph

Article in Clinical proteomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors.

Zaynab MousavianDepartment of Global Health, Rollins School of Public Health, Emory University, Atlanta, GA, USA. zaynab.mousavian@ki.se.
Mark R SegalDepartment of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA, USA.
Roger I CalderonAdvanced Research and Health, Lima, Peru.
Juaneta LuizDepartment of Pediatrics and Child Health, South African Medical Research Council Unit on Child and Adolescent Health, University of Cape Town, Cape Town, South Africa.
Esin NkereuwemMedical Research Council Unit, The Gambia at the London School of Hygiene and Tropical Medicine GM, Fajara, The Gambia.
Peter WambiUganda Tuberculosis Implementation Research Consortium, Walimu, Kololo, Kampala, Uganda.
Mandar ParadkarByramjee Jeejeebhoy Government Medical College-Johns Hopkins University Clinical Research Site, Pune, India.
Molly F FrankeHarvard Medical School, Boston, MA, USA.
Gunilla KälleniusDivision of Infectious Diseases, Department of Medicine Solna and Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden.
Beate KampmannMedical Research Council Unit, The Gambia at the London School of Hygiene and Tropical Medicine GM, Fajara, The Gambia.
Aarti KinikarByramjee Jeejeebhoy Government Medical College and Sassoon General Hospitals, Pune, India.
George B Sigal, Meso Scale Diagnostics, LLC, Rockville, MD, USA.
Christopher SundlingDivision of Infectious Diseases, Department of Medicine Solna and Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden.
Danielle L SwaneyJ. David Gladstone Institutes, San Francisco, CA, USA.
Eric WobudeyaUganda Tuberculosis Implementation Research Consortium, Walimu, Kololo, Kampala, Uganda.
Heather J ZarDepartment of Pediatrics and Child Health, South African Medical Research Council Unit on Child and Adolescent Health, University of Cape Town, Cape Town, South Africa.
Jeffrey M CollinsDivision of Infectious Diseases, Department of Medicine, Emory University School of Medicine, Atlanta, GA, USA.
Adithya CattamanchiInstitute for Global Health Sciences, Center for Tuberculosis, University of California San Francisco, San Francisco, CA, USA.
Joel D ErnstDepartment of Medicine, Division of Experimental Medicine, University of California San Francisco, San Francisco, CA, USA.
Devan JaganathInstitute for Global Health Sciences, Center for Tuberculosis, University of California San Francisco, San Francisco, CA, USA. devan.jaganath@ucsf.edu.

Funding

Sequencing CoreU19AI109755 · NIAID · HARVARD MEDICAL SCHOOL · PI CHANDLER, DARRELL P, CULHANE, AEDIN C · 2014 to 2018
$29.1M
Emory/Georgia TB Research Advancement Center (TRAC)P30AI168386 · NIAID · EMORY UNIVERSITY · PI Jeffrey M Collins · 2022 to 2026
$5.8M
Immunometabolic Biomarkers to Advance TB Diagnosis and Treatment MonitoringR01AI182244 · NIAID · EMORY UNIVERSITY · PI Jeffrey M Collins · 2024 to 2026
$2.2M
High resolution plasma metabolomics to identify biomarkers of tuberculosisK23AI144040 · NIAID · EMORY UNIVERSITY · PI COLLINS, JEFFREY M · 2019 to 2023
$911k
National Institutes of Health (NIH) K23AI144040National Institutes of Health (NIH) R01AI152161, R01AI175312National Institutes of Health (NIH) U19AI109755NIAID NIH HHS P30 AI168386NIAID NIH HHS R01 AI182244the Heart-Lung Foundation 20220566the National Heart, Lung and Blood Institute K23HL153581the Swedish Research Council 2019-04663, 2020-03602the Swedish Research Council 2021-03706, 2023-01943
6 · The paper itself

Abstract

backgroundTuberculosis (TB) remains a global health threat, affecting over a million children under the age of 15 annually. Many children with TB do not receive treatment due to challenges in diagnosis.

methodsWe performed a multi-omics analysis for pediatric TB by integrating plasma proteomics and metabolomics data from children with presumptive TB across four high-burden countries. Pathway enrichment analysis was conducted using multiGSEA to identify relevant immune and metabolic pathways. We also applied mixOmics and multiview approaches for diagnostic biomarker discovery and compared the performance of multi-omics signatures with those derived from single-omics datasets.

resultsEnrichment analysis revealed several immune and metabolic pathways, including PTEN and RUNX2 regulation pathways, as well as arginine and proline metabolism, that were uniquely identified through data integration. While the multi-omics model showed marginal improvement over single-omics models, proteomics alone generally outperformed metabolomics and demonstrated greater potential for accurately classifying Confirmed TB versus Unlikely TB in children.

conclusionThese findings demonstrate the advantage of combining complementary molecular layers to gain a deeper understanding of disease mechanisms and highlight the potential of proteomics for improving pediatric TB diagnosis.

Identifiers

PMID42260364
PMCPMC13277094

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.