Evidence map›Paper›PMID 42256625›Full record

ArticleJournal of scleroderma and related disorders2026

Transcriptomic profiling of myocardial biopsies reveals metabolic suppression and autophagy activation in systemic sclerosis-associated primary heart involvement.

Yohei Isomura, Yoshio Nakano, Yoshiaki Kubota, Tsunenori Saito, Satsuki Noma, Kai Miyazaki, Yukako Shintani-Domoto, Kuniya Asai, Satoru Miyazaki, Hayashi Yamamoto and 1 more

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Article in Journal of scleroderma and related disorders, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Yohei IsomuraDepartment of Allergy and Rheumatology, Nippon Medical Schoo, Tokyo, Japan.
Yoshio NakanoDepartment of Pharmacy, Faculty of Pharmaceutical Sciences, Tokyo University of Science-Katsushika Campus, Tokyo, Japan.
Yoshiaki KubotaDepartment of Cardiovascular Medicine, Nippon Medical School, Tokyo, Japan.
Tsunenori SaitoDepartment of Cardiovascular Medicine, Nippon Medical School, Tokyo, Japan.
Satsuki NomaDepartment of Cardiovascular Medicine, Nippon Medical School, Tokyo, Japan.
Kai MiyazakiDepartment of Integrated Diagnostic Pathology, Nippon Medical School, Tokyo, Japan.
Yukako Shintani-DomotoDepartment of Integrated Diagnostic Pathology, Nippon Medical School, Tokyo, Japan.
Kuniya AsaiDepartment of Cardiovascular Medicine, Nippon Medical School, Tokyo, Japan.
Satoru MiyazakiDepartment of Pharmacy, Faculty of Pharmaceutical Sciences, Tokyo University of Science-Katsushika Campus, Tokyo, Japan.
Hayashi YamamotoDepartment of Molecular and Cellular Dynamics, Institute for Advanced Medical Sciences, Nippon Medical School, Tokyo, Japan.
Masataka KuwanaDepartment of Allergy and Rheumatology, Nippon Medical Schoo, Tokyo, Japan.ORCID https://orcid.org/0000-0001-8352-6136

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: To characterise the myocardial transcriptomic landscape of patients with systemic sclerosis (SSc) with primary heart involvement (pHI) and identify molecular pathways underlying its pathogenesis. Design: A single-centre study exploring the molecular pathogenesis of SSc-pHI through transcriptomic analysis of endomyocardial biopsy specimens. Setting: Basic research. Participant: This study enrolled seven patients with SSc-pHI and eight patients with dilated cardiomyopathy (DCM) who had undergone endomyocardial biopsy for clinical practice purposes. Interventions: No intervention. Main outcome measures: Not applicable. Methods: Endomyocardial biopsy specimens from patients with SSc-pHI and those with DCM underwent whole RNA sequencing. To enable indirect comparison with non-failing (NF) myocardium, public RNA sequencing data of NF and DCM samples were integrated using DCM as a shared reference. Differential gene expression, pathway enrichment (Ingenuity Pathway Analysis and Gene Set Enrichment Analysis) and immune and stromal cell deconvolution were performed. Histopathological evaluation included LC3 immunostaining and transmission electron microscopy (TEM). Results: A total of 700 genes were differentially expressed between SSc and DCM myocardium. Mitochondrial energy metabolism pathways, including oxidative phosphorylation, fatty acid β-oxidation and the tricarboxylic acid cycle, were markedly suppressed in SSc. Indirect comparison with NF myocardium confirmed reciprocal regulation of mitochondrial metabolism and suggested enhanced autophagy. Cell deconvolution revealed enrichment of M1-like macrophages in SSc myocardium. LC3 immunostaining and TEM revealed increased autophagic vacuoles, lipid droplet accumulation and ischaemia-like ultrastructural alterations. Conclusions: SSc myocardium exhibits metabolic reprogramming characterised by mitochondrial dysfunction and enhanced autophagy, accompanied by macrophage activation.

Indexed as

AutophagyHeart DiseasesScleroderma, Systemic

Identifiers

PMID42256625
PMCPMC13231729

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.