ArticleFrontiers in fungal biology2026
Comparative genomics of Eastern-Indian
Article in Frontiers in fungal biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
Introduction: Rice false smut (RFS), caused by Methods: In the present study, a high-quality whole-genome sequence of the Eastern Indian Results: The assembled NRRI-FSM-1 genome was 36.3 Mb in size, comprising 985 scaffolds with an N50 of 5,781,932 bp. A total of 328,782 variants were identified, including 302,430 SNPs, 13,224 insertions, and 13,128 deletions. Additionally, 5,977 simple sequence repeats (SSRs) and 9,257 protein-coding genes were identified, representing the highest number of predicted genes reported so far among false smut genomes. Comparative genomics revealed substantial genomic diversity among the six strains, including variation in candidate effector repertoires, gene content, and population structure at both global and intra-Indian levels. Notably, significant diversity was observed among Indian strains, indicating considerable genomic variation across geographical regions. Discussion: These findings expand the pathogenomic resource base for
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