Evidence map›Paper›PMID 42255486›Full record

ArticleInternational journal of genomics2026

Single Cell and Machine Learning-Based Analysis of Lysosome Mediated Cell Death Reveals Novel Prognostic Biomarkers and Therapeutic Targets in Cervical Cancer.

Yurong Cheng, Xuan Li, Dong Yan

Abstract read
In one paragraph

Article in International journal of genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yurong ChengDepartment of Oncology, Beijing Luhe Hospital, Capital Medical University, Beijing, China, luhehospital.com.ORCID https://orcid.org/0009-0006-1781-1733
Xuan LiDepartment of Obstetrics and Gynecology, Beijing Luhe Hospital, Capital Medical University, Beijing, China, luhehospital.com.ORCID https://orcid.org/0009-0001-7676-0538
Dong YanDepartment of Oncology, Beijing Luhe Hospital, Capital Medical University, Beijing, China, luhehospital.com.ORCID https://orcid.org/0000-0003-2483-4029

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Cervical cancer is among the most prevalent gynecological malignancies globally, and its inherent molecular heterogeneity remains a persistent obstacle to uniform treatment efficacy and patient survival. Lysosome-mediated cell death (LDCD) has recently emerged as a mechanistically distinct form of regulated cell death with growing relevance in tumor biology, influencing both oncogenic progression and responsiveness to therapy. Nevertheless, its functional significance in cervical cancer and its interactions with the tumor microenvironment (TME) at single-cell resolution remain insufficiently characterized. Methods: We conducted an integrative analysis combining single-cell RNA sequencing (scRNA-seq) with 15 machine learning algorithms to examine LDCD-related gene expression patterns in cervical cancer. Multicohort transcriptomic data were obtained from TCGA and GEO databases, and scRNA-seq data were retrieved from the GSE138080 dataset. Core hub genes were identified through differential expression analysis, protein-protein interaction network construction, and consensus clustering. Prognostic models were built using multiple machine learning frameworks and evaluated by concordance index. Immune cell infiltration was quantified via CIBERSORT, and single-cell-level validation was performed with the Seurat pipeline. Results: Six LDCD-associated hub genes-CTSV, FER, GGA2, LAMP3, STAB1, and STAB2-were identified as significant prognostic determinants. Univariate Cox regression demonstrated that CTSV ( Conclusions: Our findings establish LDCD as a functionally important mechanism in cervical cancer at single-cell resolution and demonstrate the translational utility of integrating scRNA-seq with machine learning for the discovery of novel prognostic biomarkers and therapeutic targets.

Indexed as

cervical cancerlysosome-mediated cell deathmachine learningprognostic biomarkerssingle-cell RNA sequencing

Identifiers

PMID42255486
PMCPMC13239096

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.