Evidence map›Paper›PMID 42249101›Full record

ArticleNature methods2026

Brightness demixing for simultaneous multi-target imaging in 3D single-molecule localization microscopy.

Laurent Le, Surabhi K Sreenivas, Emmanuel Fort, Sandrine Lévêque-Fort

Abstract read
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In one paragraph

Article in Nature methods, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Simulating Multicolor Super-Resolution Imaging Using an RGB Camera.Computational and structural biotechnology journal · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Laurent LeUniversité Paris Saclay, CNRS, Institut des Sciences Moléculaires d'Orsay, Orsay, France.ORCID http://orcid.org/0000-0002-0487-7729
Surabhi K SreenivasUniversité Paris Saclay, CNRS, Institut des Sciences Moléculaires d'Orsay, Orsay, France.ORCID http://orcid.org/0000-0001-8508-8184
Emmanuel Fort *Institut Langevin, ESPCI Paris, Université PSL, CNRS, Paris, France.ORCID http://orcid.org/0000-0003-2770-3753
Sandrine Lévêque-Fort *Université Paris Saclay, CNRS, Institut des Sciences Moléculaires d'Orsay, Orsay, France. sandrine.leveque-fort@cnrs.fr.ORCID http://orcid.org/0000-0002-9218-3363

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-22-CE42-0023 TimelocAgence Nationale de la Recherche (French National Research Agency) LABEX WIFI, ANR-10-LABX-24EC | EU Framework Programme for Research and Innovation H2020 | H2020 European Institute of Innovation and Technology (H2020 The European Institute of Innovation and Technology) 871124 Laserlab-Europe for Joint Research ActivityEC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) ERC program under grant agreement no.101098103 (TimeNanolive)
6 · The paper itself

Abstract

Single-molecule localization microscopy has enabled high-resolution imaging, but the simultaneous detection of multiple fluorophores traditionally relies on spectral-based separation, which is inherently constrained by spectral overlap. Here we introduce brightness demixing, a method for fluorophore discrimination that exploits brightness, which directly depends on the fluorophore extinction coefficient and quantum yield. By oversampling blinking events, we precisely quantify photon flux as a proxy for brightness, enabling robust differentiation of fluorophores independent of their spectral properties, without requiring additional spectral separation. Brightness demixing operates within a single detection channel, eliminating the need for additional spectral filters or cameras. We demonstrate this approach with simultaneous two- and three-target imaging in both two- and three-dimensional configurations. By maintaining single-wavelength excitation and minimizing chromatic aberrations, this method notably enhances multiplexing in single-molecule localization microscopy while remaining fully compatible with existing setups. Brightness Demixing thus offers a simple yet powerful approach for expanding multi-target imaging capabilities in super-resolution microscopy.

Indexed as

Fluorescent DyesImaging, Three-DimensionalSingle Molecule ImagingMicroscopy, FluorescenceFluorescent Dyes

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.