Evidence map›Paper›PMID 42246676›Full record

ArticleThe Plant cell2026

Sexual life cycle establishes the unicellular red algae Cyanidiophyceae as a genetically tractable model for eukaryotic evolution.

Shunsuke Hirooka, Takayuki Fujiwara, Mark Seger, Soichi Inagaki, Shota Yamashita, Dai Tsujino, Ryo Onuma, Yu Kanesaki, Satoru Watanabe, Yuu Hirose and 8 more

Abstract read
In one paragraph

Article in The Plant cell, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Shunsuke HirookaDepartment of Gene Function and Phenomics, National Institute of Genetics, 1111 Yata, Mishima, Shizuoka 411-8540, Japan.ORCID 0000-0001-6247-8104
Takayuki FujiwaraDepartment of Gene Function and Phenomics, National Institute of Genetics, 1111 Yata, Mishima, Shizuoka 411-8540, Japan.ORCID 0000-0001-6226-3955
Mark SegerArizona Center for Algae Technology and Innovation, Arizona State University, 7418 Innovation Way South, Mesa, AZ 85212, United States.ORCID 0000-0003-0665-8260
Soichi InagakiDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan.ORCID 0000-0003-4090-826X
Shota YamashitaDepartment of Gene Function and Phenomics, National Institute of Genetics, 1111 Yata, Mishima, Shizuoka 411-8540, Japan.ORCID 0000-0001-7478-5953
Dai TsujinoDepartment of Gene Function and Phenomics, National Institute of Genetics, 1111 Yata, Mishima, Shizuoka 411-8540, Japan.ORCID 0000-0003-0539-4742
Ryo OnumaDepartment of Marine Biodiversity, Kobe University Research Center for Inland Seas, 2746 Iwaya, Awaji, Hyogo 656-2401, Japan.ORCID 0000-0003-1592-0814
Yu KanesakiDepartment of Laboratory Sciences, Graduate School of Health Sciences, Gunma University, 3-39-22, Showa-machi, Maebashi, Gunma 371-8514, Japan.ORCID 0000-0003-3537-9789
Satoru WatanabeDepartment of Bioscience, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo 156-8502, Japan.ORCID 0000-0001-7456-5053
Yuu HiroseDepartment of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi 441-8580, Japan.ORCID 0000-0003-1116-8979
Ryudo OhbayashiDepartment of Biological Sciences, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo 192-0397, Japan.ORCID 0000-0001-6359-0122
Mari TakusagawaGraduate School of Agricultural and Life Sciences, The Univeraity of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.ORCID 0000-0003-2854-4483
Baifeng ZhouDepartment of Gene Function and Phenomics, National Institute of Genetics, 1111 Yata, Mishima, Shizuoka 411-8540, Japan.ORCID 0009-0004-0561-0980
Reiko TomitaDepartment of Gene Function and Phenomics, National Institute of Genetics, 1111 Yata, Mishima, Shizuoka 411-8540, Japan.
Fumi YagisawaResearch Facility Center, University of the Ryukyus, 1 Senbaru, Nishihara-cho, Nakagami-gun, Okinawa 903-0213, Japan.ORCID 0000-0002-8534-3824
Peter LammersArizona Center for Algae Technology and Innovation, Arizona State University, 7418 Innovation Way South, Mesa, AZ 85212, United States.ORCID 0000-0002-7312-0797
Atsuko H IwaneCenter for Biosystems Dynamics Research, Laboratory for Cell Field Structure, RIKEN, 3-10-23 Kagamiyama, Higashihiroshima, Hiroshima 739-0046, Japan.ORCID 0000-0003-2641-2268
Shin-Ya MiyagishimaDepartment of Gene Function and Phenomics, National Institute of Genetics, 1111 Yata, Mishima, Shizuoka 411-8540, Japan.ORCID 0000-0002-9111-0832

Funding

Grants-in-Aid for Scientific Research 23K05882Grants-in-Aid for Scientific Research 24H00579Japan Science and Technology AgencyJapan Society for the Promotion of Science JPMJMI22E1
6 · The paper itself

Abstract

The thermo-acidophilic unicellular algal class Cyanidiophyceae diverged from other red algae soon after primary chloroplast acquisition. Cyanidiophyceae possess extremely simple genomes (8.7 to 17.8 Mb; approximately 4,800 to 7,800 genes), and the cell wall-less, genetically tractable strain Cyanidioschyzon merolae 10D has served as a model organism. However, its unknown sexual life cycle has limited its utility in studies of evolution and genetics. Here, we show that in the genera Cyanidioschyzon, Cyanidiococcus, and Cyanidium, the cell-walled diploid form, exclusively observed in nature, produces a cell wall-less haploid form when the culture pH is lowered, and both proliferate asexually. Cz. merolae 10D is a haploid clone that forms a cell-walled diploid through mating with other haploid clones. In addition, we generated high-quality genomic resources with phase-specific transcriptomes, identified a compact candidate mating-type region, and developed genetic manipulation systems using the cell wall-less haploids of these genera. We further uncovered phase-specific distributions of histone H3 lysine 27 trimethylation linked to haploid- and diploid-specific gene expression, including transcription factors involved in differentiation associated with sexual reproduction in plants. Additionally, biparental inheritance of organelle DNA occurs following isogamous mating of haploid cells but resolves into uniparental inheritance during diploid proliferation. These advances position Cyanidiophyceae as a powerful model lineage for studying early Archaeplastida evolution, the shared mechanisms of photosynthetic eukaryotes, and environmental adaptation.

Indexed as

Biological EvolutionRhodophytaCell WallHaploidy

Identifiers

PMID42246676
PMCPMC13353863

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.