Evidence map›Paper›PMID 42245654›Full record

ArticleFrontiers in immunology2026

Serum proteomic profiling of sepsis patients reveals a protein-based diagnostic model, with metabolomic insights into carbapenem-resistant

Juan He, Siqi Luo, Wenyun Xu, Yuanzhuo Chen, Guorong Liu, Jianguo Tang, Yong Yang, Bing Zhao, Li Ma, Huiqiu Sheng and 1 more

Abstract read
In one paragraph

Article in Frontiers in immunology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Juan He *Department of Pharmacy, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Siqi Luo *SpecAlly Life Technology Co., Ltd., Wuhan, China.
Wenyun Xu *Department of Pharmacy, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Yuanzhuo ChenDepartment of Emergency, the Tenth People's Hospital, Tongji University, Shanghai, China.
Guorong LiuDepartment of Emergency, Gongli Hospital of Shanghai Pudong New Area, Shanghai, China.
Jianguo TangDepartment of Emergency, the Fifth People's Hospital of Shanghai, Fudan University, Shanghai, China.
Yong YangSpecAlly Life Technology Co., Ltd., Wuhan, China.
Bing ZhaoDepartment of Emergency, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Li MaDepartment of Emergency, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Huiqiu ShengDepartment of Emergency, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Enqiang MaoDepartment of Emergency, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Sepsis caused by carbapenem-resistant Klebsiella pneumoniae (CRKP) is associated with high mortality. Current research is predominantly pathogen-centric, creating a knowledge gap regarding the host's systemic molecular response, which is critical for understanding outcomes and developing diagnostic strategies. This study aimed to characterize the host serum proteomic and metabolomic landscape of CRKP sepsis and to develop a proteomics-derived biomarker panel for differential diagnosis, while integrating metabolomic data to gain mechanistic insights into host pathways. Methods: Serum samples from sepsis patients, including culture-negative controls, and individuals infected with carbapenem-susceptible or carbapenem-resistant Klebsiella pneumoniae (CSKP and CRKP), underwent in-depth proteomic and metabolomic profiling. Differential expression, functional enrichment, and trend analyses were performed to characterize host molecular alterations associated with carbapenem resistance. Machine learning approaches were applied to construct diagnostic models based on host-derived molecular features. Candidate biomarker proteins were further validated using targeted parallel reaction monitoring (PRM) in an independent cohort. Results: We identified 85 differentially expressed proteins (DEPs) distinguishing CRKP from CSKP, enriched in viral infection-related pathways, antigen presentation, and phagosome function. Trend analysis revealed a protein cluster (51 proteins) with stepwise increased abundance from controls to CSKP to CRKP, implicating coagulation, immune signaling, and metabolic dysfunction. Based on proteomic data, a four-protein biomarker panel (IGHV1-8, ITGA2, PKP1, IGFBP6) effectively differentiated CRKP from CSKP (test AUC = 0.920). Targeted proteomic validation in an independent cohort confirmed the differential expression of key model proteins, including IGFBP6 (CRKP vs. CSKP) and APOA2 (CSKP vs. controls). Metabolomics identified 128 differential metabolites in CRKP vs. CSKP, with enrichment in thermogenesis and amino acid/fatty acid degradation pathways. Integrated pathway analysis of proteomic and metabolomic data highlighted dysregulation in cysteine/methionine metabolism and the folate-mediated one-carbon pool, with MAT2B as a key connecting protein. Conclusion: This first host-based multi-omics study of CRKP sepsis suggests distinct molecular signatures linked to resistance and disease severity. The independently validated biomarkers show high diagnostic potential, offering a preliminary foundation for early, non-invasive diagnosis and precision intervention strategies.

Indexed as

Blood ProteinsCarbapenemsKlebsiella InfectionsKlebsiella pneumoniaeProteomeProteomicsSepsisAgedAnti-Bacterial AgentsBiomarkersFemaleHumansMaleMetabolomeMetabolomicsMiddle AgedAnti-Bacterial AgentsBiomarkersBlood ProteinsCarbapenemsProteomecarbapenem-resistant Klebsiella pneumoniaemachine learningmetabolomicsproteomicssepsis

Identifiers

PMID42245654
PMCPMC13230049

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